Detailed information of ANN26425-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:269088...307152
NR annotation: XP_020623292.1, GRAM domain-containing protein 1B-like isoform X1 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80TI0Protein Aster-B OS=Mus musculus OX=10090 GN=Gramd1b PE=1 SV=2
Q3KR37Protein Aster-B OS=Homo sapiens OX=9606 GN=GRAMD1B PE=1 SV=1
Q8IYS0Protein Aster-C OS=Homo sapiens OX=9606 GN=GRAMD1C PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001069 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02893
all species →		GRAMGRAM domainDomainInterproscan
PF16016
all species →		VAStVAD1 Analog of StAR-related lipid transfer domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004182
all species →		DomainGRAM domainInterproscan
IPR051482
all species →		FamilyCholesterol transport domain-containing proteinInterproscan
IPR031968
all species →		DomainVASt domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23319
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0032366
all species →		Biological Processintracellular sterol transportInterproscan
GO:0032934
all species →		Molecular Functionsterol bindingInterproscan
GO:0120015
all species →		Molecular Functionsterol transfer activityInterproscan
GO:0140268
all species →		Cellular Componentendoplasmic reticulum-plasma membrane contact siteInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN26425-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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