Genomic Location: Scaffold_536__1_contigs__length_87871:35480...36862
NR annotation: RKU11988.1, hypothetical protein C6501_11825 [Candidatus Poribacteria bacterium]
Species abbreviation MGRIS · all data for this species · gene families
| CDS |
| ANN26426-RA |
| Transcript |
| ANN26426-RA |
| Protein |
| ANN26426-RA |
| UniProt accession | Description |
|---|---|
| P27713 | Nif-specific regulatory protein OS=Herbaspirillum seropedicae OX=964 GN=nifA PE=4 SV=1 |
| P14375 | Transcriptional regulatory protein ZraR OS=Escherichia coli (strain K12) OX=83333 GN=zraR PE=1 SV=2 |
| Q8X613 | Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7 OX=83334 GN=zraR PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0233594 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00158 all species → | Sigma54_activat | Sigma-54 interaction domain | Domain | Interproscan |
| PF02954 all species → | HTH_8 | Bacterial regulatory protein, Fis family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002197 all species → | Domain | DNA binding HTH domain, Fis-type | Interproscan |
| IPR025662 all species → | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| IPR002078 all species → | Domain | RNA polymerase sigma factor 54 interaction domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR025943 all species → | Binding_site | Sigma-54 interaction domain, ATP-binding site 2 | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32071 all species → | TRANSCRIPTIONAL REGULATORY PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0043565 all species → | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008134 all species → | Molecular Function | transcription factor binding | Interproscan |
ANN26426-RA.
