Detailed information of ANN26443-RA in Montipora grisea

Genomic Location: Scaffold_167__1_contigs__length_173853:57167...58123
NR annotation: MCE2467119.1, tRNA pseudouridine(55) synthase TruB [Caldilineaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q47RU8tRNA pseudouridine synthase B OS=Thermobifida fusca (strain YX) OX=269800 GN=truB PE=3 SV=1
Q1LLR8tRNA pseudouridine synthase B OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=truB PE=3 SV=1
B3R1E2tRNA pseudouridine synthase B OS=Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CCUG 44338 / CIP 107171 / LMG 19424 / R1) OX=977880 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03177truB, PUS4, TRUB1; tRNA pseudouridine55 synthaseEC:5.4.99.25
Transfer RNA biogenesisko03016deepkoala

TOP