Detailed information of ANN26501-RA in Montipora grisea

Genomic Location: Scaffold_1166__1_contigs__length_60416:32614...50202
NR annotation: NIP32262.1, ribonuclease III [Candidatus Dadabacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6MLR5Ribonuclease 3 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=rnc PE=3 SV=1
B9K9K8Ribonuclease 3 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=rnc PE=3 SV=1
B2A2N1Ribonuclease 3 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) OX=457570 GN=rnc PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF00361Proton_antipo_MProton-conducting membrane transporterFamilyInterproscan
PF00420Oxidored_q2NADH-ubiquinone/plastoquinone oxidoreductase chain 4LFamilyInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF00521DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF14622Ribonucleas_3_3Ribonuclease-III-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013758Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR001750DomainNADH:quinone oxidoreductase/Mrp antiporter, membrane subunitInterproscan
IPR039428FamilyNADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeInterproscan
IPR017985Conserved_siteDNA methylase, N-4 cytosine-specific, conserved siteInterproscan
IPR011907FamilyRibonuclease IIIInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR000999DomainRibonuclease III domainInterproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR002205DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0009307Biological ProcessDNA restriction-modification systemInterproscan
GO:0015667Molecular Functionsite-specific DNA-methyltransferase (cytosine-N4-specific) activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

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