Gene detail

Detailed information of ANN26502-RA in Montipora grisea

Genomic Location: Scaffold_1166__1_contigs__length_60416:39120...43168
NR annotation: NIP32266.1, homoserine dehydrogenase [Candidatus Dadabacteria bacterium]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN26502-RA

ATGCAATCCGTTAATCTAGGGTTAATCGGAGCCGGAACTATCGGGTGCGGCGTATATAAACTAATCACCGAAAACAGCGATATAATAGAGAAAAGAACTGGAATTAAACTAAACATAAAAAAGATTGCCGATATTGATATAGACAGAAAAAGACCTGTTGACATTCCAAGAGAGCTATTCATCAAAGACGCGTACGAAATACTAAATGATGATTCAATCTCCATTGTCATTGAGCTTGTCGGAGGAACAACAGTTTCCAAAGATTTCGTTTTGACAGCTATAAAAAACGGCAAAAACGTTGTCACAGCAAATAAAGCGCTTATCGCTCATCACGGTGAAGAAATTTTCCGAACAGCGCAAGAAAATAATGTGGAAGTCGCTTTTGAGGCTAGCGTGGGGGGCGGCATACCTATTATAAAAGCTAACCAGGAAAGCTATGTGGCAAACCATATAAAATCTATCCATGGAATAATGAACGGAACTTCTAATTACATACTCCATAAAATGACAGAGGAGGAAAGCAACTTTGAAGATGTGCTTAAACAAGCACAGGAGCAAGGCTATGCGGAAGCTGACCCCTCATTTGATATAGACGGTATAGACGCCGCGCACAAACTCTCCATTTTAATCATGCTGTCGTATGGAATCTTTTTGAATTTTGATGATATACCGATAGAAGGAATAAGAAATATCACCCAGACCGACATAAGATTTGCAGACCAGCTCGGCTATAAAATAAAGTTACTCGCCATAGTTAAATCAATGGAAAAAGGGCTGCATGCGGGGGTTTATCCTACGCTTGTTAAAAAGCATACTCAACTTGCAGATGTAAAAGAGGCATTTAATGCAATATATGTTGTAGGGGACGCCGTAGGACCAACCATGCTTTATGGCATGGGAGCGGGAATGCTTCCGACAGCAAGCGCCGTTGTCGGTGATATAGTTTCCATATCAAAAAATCTTTCAAATGAAAACAATGTTAATCTCCCCAAACTTTACTCACGTGGTGAAAAAATTAAACTCTTAGAACTTAAAAAATCGCTCAACAAATACTACTTAAGATTCCAAGTTGAAGACCGCCCCGGAACACTAGGAAAAATAACGAATATACTCGGAAAATTTAATATAAGCATAGAGTCGGTTATCCAAAAAGCCCGGGAAGATAACGGCGGCGAAGTTCCAGTAATTATGATGACACATAAGATTAAAAGCGACAATAAATTAGAAGAGAGCTTTGAAAACCTTATAAGAGGAATGGCACATGAACTCAACAATCCTTTAAGCGGTATTAAAGGTGCCGCCCAACTAATATCTGGAAATCTATCCTCAGATGAACTATACAAATGTTCTGAGATTATAGTAAAAGAGGTTGACAGATTAAAGAGTCTGGTTGAAAGACTAAAGAGATTTGATAGCTTTGATAAGGAATCTTTTGCTCTGAAAGCAATAGAAAACTACAAAAGCTCAAAAAAACTAAATCTCTCAAAAACAGACATAGATGTAGAACCAATCAAACTTGAAGAAATTGTCGGCAATTCCAATCAAATGTTAAATATCTACAAAATAATAGGGAGAGTTGCTGATAAGGATATTACGGTTTTAGTTACAGGCGAAAGCGGAACGGGTAAAGAGTTAATCGCAAATGCAATCCATACAAACAGCCTAAGAAAAGATAGAACAATGGTATCTATAAATATTGCCGCAATACCGAAGGAGTTGATTGAAAGCGAACTCTTTGGCTATGAAAAAGGGGCTTTCACTGGTGCAGTGCGATCTAAAAAAGGTAGATTTGAAGAAGCTAACGGAGGCAGTCTCCACCTTGACGAAATAGGGGAACTATCTTTTGACCTGCAATCTAAACTATTGAGAGTTTTAGAAGAAAAAAAAATATACAGATTGGGAAGCGAAAATCCAATTGACGTAGATGTAAGAATAATCGCCGCTACAAACAAAAATTTAAAGAGTGAAGTCCAAAACAAAACATTCAGAGAAGACCTATTTTACAGACTAAATGCAATAACAATAAATATTCCGCCTTTAAGAGAAAGAAAAGAAGATATAGAGTTTTTAATAGACCACTTTGTTAGTAAATACTGCATGGAACTGAACATAGAAAGAAAAATATTCCCCGCTAAATCTAAAGAGATACTTATTAATTACAATTGGCCCGGTAATGTGAGAGAATTGGAGAATGTAATAAAACGACTCTTGGTTTTAACTCCGGATAATATCATAGATGTTCACACTGTTAAAGAAGAAATAAATGACATAAAAAAGGGTAGCGAAAATATCCCCATTGATGAAAAAATCAAAAATCAGTTATCACAGATGATTCAAGACATAGATGAATCTTCAAACGATGTTTATCGTGAGATTATAAGCAAGTTTGAAAAACAGTTAATAGAATTAGTACTTGCAAAATTTAACGGCAACAAAAAAAAGGCGGCGGAAATTTTGGGAATTAATAGAAACACGCTTTCAAAGAAAATTTCAGAGCTTAATATAAGTGTGAAATAG

Transcript

ANN26502-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F8J4	Homoserine dehydrogenase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=NGO_0779 PE=1 SV=1
P29365	Homoserine dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=hom PE=3 SV=2
P19582	Homoserine dehydrogenase OS=Bacillus subtilis (strain 168) OX=224308 GN=hom PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0025230 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01842 all species →	ACT	ACT domain	Domain	Interproscan
PF03447 all species →	NAD_binding_3	Homoserine dehydrogenase, NAD binding domain	Domain	Interproscan
PF00512 all species →	HisKA	His Kinase A (phospho-acceptor) domain	Domain	Interproscan
PF02954 all species →	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan
PF00742 all species →	Homoserine_dh	Homoserine dehydrogenase	Domain	Interproscan
PF00158 all species →	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045865 all species →	Homologous_superfamily	ACT-like domain	Interproscan
IPR002912 all species →	Domain	ACT domain	Interproscan
IPR025944 all species →	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR036097 all species →	Homologous_superfamily	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR019811 all species →	Conserved_site	Homoserine dehydrogenase, conserved site	Interproscan
IPR005106 all species →	Domain	Aspartate/homoserine dehydrogenase, NAD-binding	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR003661 all species →	Domain	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR025662 all species →	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR002197 all species →	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR001342 all species →	Domain	Homoserine dehydrogenase, catalytic	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR002078 all species →	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071 all species →	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000155 all species →	Molecular Function	phosphorelay sensor kinase activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN26502-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.