Gene detail

Detailed information of ANN26696-RA in Montipora grisea

Genomic Location: Scaffold_618__1_contigs__length_83332:35089...36674
NR annotation: MXW15161.1, elongation factor Ts [Rhodothermaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2S6J2	Uridylate kinase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=pyrH PE=3 SV=1
Q11XK2	Uridylate kinase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=pyrH PE=3 SV=1
A0LXJ4	Uridylate kinase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=pyrH PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012477 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00696 all species →	AA_kinase	Amino acid kinase family	Family	Interproscan
PF00889 all species →	EF_TS	Elongation factor TS	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018101 all species →	Conserved_site	Translation elongation factor Ts, conserved site	Interproscan
IPR015963 all species →	Family	Uridylate kinase, bacteria	Interproscan
IPR001048 all species →	Domain	Aspartate/glutamate/uridylate kinase	Interproscan
IPR036402 all species →	Homologous_superfamily	Elongation factor Ts, dimerisation domain superfamily	Interproscan
IPR036393 all species →	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan
IPR001816 all species →	Family	Translation elongation factor EFTs/EF1B	Interproscan
IPR014039 all species →	Domain	Translation elongation factor EFTs/EF1B, dimerisation	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42833 all species →	URIDYLATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0033862 all species →	Molecular Function	UMP kinase activity	Interproscan
GO:0006225 all species →	Biological Process	UDP biosynthetic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01768	E4.6.1.1; adenylate cyclase	EC:4.6.1.1	Longevity regulating pathway - multiple species	ko04213	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.