Gene detail

Detailed information of ANN26717-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:6805166...6811820
NR annotation: CAH3143124.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D8Z1	Activating signal cointegrator 1 complex subunit 1 OS=Mus musculus OX=10090 GN=Ascc1 PE=1 SV=1
Q8N9N2	Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens OX=9606 GN=ASCC1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006980 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013 all species →	KH_1	KH domain	Domain	Interproscan
PF10469 all species →	AKAP7_NLS	AKAP7 2'5' RNA ligase-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004087 all species →	Domain	K Homology domain	Interproscan
IPR009210 all species →	Family	Activating signal cointegrator 1 complex subunit 1	Interproscan
IPR047538 all species →	Domain	Activating signal cointegrator 1 complex subunit 1, type I KH domain	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088 all species →	Domain	K Homology domain, type 1	Interproscan
IPR019510 all species →	Domain	A-kinase anchor protein 7-like, phosphoesterase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13360 all species →	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006307 all species →	Biological Process	DNA alkylation repair	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18666	ASCC1; activating signal cointegrator complex subunit 1	-	Transcription	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.