Gene detail

Detailed information of ANN26776-RA in Montipora grisea

Genomic Location: Scaffold_2019__1_contigs__length_46841:10378...11046
NR annotation: MCC6949103.1, isoprenyl transferase [Bradyrhizobiaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98MB9	Isoprenyl transferase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=uppS PE=3 SV=1
Q8G0D9	Isoprenyl transferase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=uppS PE=3 SV=1
Q57CY1	Isoprenyl transferase OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=uppS PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005865 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01255 all species →	Prenyltransf	Putative undecaprenyl diphosphate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036424 all species →	Homologous_superfamily	Decaprenyl diphosphate synthase-like superfamily	Interproscan
IPR001441 all species →	Family	Decaprenyl diphosphate synthase-like	Interproscan
IPR018520 all species →	Conserved_site	Di-trans-poly-cis-decaprenylcistransferase-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10291 all species →	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0002094 all species →	Molecular Function	polyprenyltransferase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008834 all species →	Molecular Function	di-trans,poly-cis-undecaprenyl-diphosphate synthase activity	Interproscan
GO:0016094 all species →	Biological Process	polyprenol biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00806	uppS; undecaprenyl diphosphate synthase	EC:2.5.1.31	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.