Detailed information of ANN26819-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:8815978...8824588
NR annotation: CAH3163778.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002080 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21222
all species →		Lamp2_2ndLysosome-associated membrane glycoprotein 2, transmembrane segmentDomainInterproscan
PF01299
all species →		LampLysosome-associated membrane glycoprotein (Lamp)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002000
all species →		FamilyLysosome-associated membrane glycoproteinInterproscan
IPR048524
all species →		DomainLysosome-associated membrane glycoprotein 2-like, transmembrane domainInterproscan
IPR048528
all species →		DomainLysosome-associated membrane glycoprotein 2-like, luminal domainsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11506
all species →		LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005765
all species →		Cellular Componentlysosomal membraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0031902
all species →		Cellular Componentlate endosome membraneInterproscan
GO:0072594
all species →		Biological Processestablishment of protein localization to organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN26819-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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