Detailed information of ANN26846-RA in Montipora grisea

Genomic Location: Scaffold_766__1_contigs__length_74753:3754...4778
NR annotation: GFR96137.1, 50S ribosomal protein L1 [Elysia marginata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1R0I5Large ribosomal subunit protein uL1 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=rplA PE=3 SV=1
B8GV68Large ribosomal subunit protein uL1 OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=rplA PE=3 SV=1
Q0ABI5Large ribosomal subunit protein uL1 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=rplA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00298Ribosomal_L11Ribosomal protein L11, RNA binding domainDomainInterproscan
PF03946Ribosomal_L11_NRibosomal protein L11, N-terminal domainDomainInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan
IPR000911FamilyRibosomal protein uL11Interproscan
IPR036769Homologous_superfamilyLarge ribosomal subunit protein uL11, C-terminal domain superfamilyInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR020783DomainLarge ribosomal subunit protein uL11, C-terminalInterproscan
IPR020784DomainLarge ribosomal subunit protein uL11, N-terminalInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR006519FamilyLarge ribosomal subunit protein uL11, bacterial-typeInterproscan
IPR036796Homologous_superfamilyLarge ribosomal subunit protein uL11, N-terminal domain superfamilyInterproscan
IPR005878FamilyLarge ribosomal subunit protein uL1, bacterial-typeInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02863RP-L1, MRPL1, rplA; large subunit ribosomal protein L1-Ribosomeko03011deepkoala

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