Detailed information of ANN26930-RA in Montipora grisea

Genomic Location: Scaffold_4607__1_contigs__length_31755:3260...4030
NR annotation: NVJ98838.1, DNA-directed RNA polymerase subunit beta' [Alphaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5VBZ7DNA-directed RNA polymerase subunit beta' OS=Rhizorhabdus wittichii (strain DSM 6014 / CCUG 31198 / JCM 15750 / NBRC 105917 / EY 4224 / RW1) OX=392499 GN=rpoC PE=3 SV=1
Q5NPK4DNA-directed RNA polymerase subunit beta' OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rpoC PE=3 SV=2
Q1GT24DNA-directed RNA polymerase subunit beta' OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) OX=317655 GN=rpoC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0234018 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04997
all species →
RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007080
all species →
DomainRNA polymerase Rpb1, domain 1Interproscan
IPR045867
all species →
FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376
all species →
DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003899
all species →
Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN26930-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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