Detailed information of ANN26933-RA in Montipora grisea

Genomic Location: Scaffold_4607__1_contigs__length_31755:12311...13841
NR annotation: UTW54326.1, 50S ribosomal protein L3 [Kordiimonas sp. SCSIO 12610]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5LLU6Large ribosomal subunit protein uL3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rplC PE=3 SV=1
B2S679Large ribosomal subunit protein uL3 OS=Brucella abortus (strain S19) OX=430066 GN=rplC PE=3 SV=1
Q2YM03Large ribosomal subunit protein uL3 OS=Brucella abortus (strain 2308) OX=359391 GN=rplC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005937 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00573
all species →		Ribosomal_L4Ribosomal protein L4/L1 familyFamilyInterproscan
PF00276
all species →		Ribosomal_L23Ribosomal protein L23FamilyInterproscan
PF00297
all species →		Ribosomal_L3Ribosomal protein L3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012678
all species →		Homologous_superfamilyRibosomal protein uL23/eL15/eS24 core domain superfamilyInterproscan
IPR002136
all species →		FamilyLarge ribosomal subunit protein uL4Interproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR019927
all species →		FamilyLarge ribosomal subunit protein uL3, bacterial/organelle-typeInterproscan
IPR023574
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL4 domain superfamilyInterproscan
IPR009000
all species →		Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR013025
all species →		FamilyLarge ribosomal subunit protein uL23-likeInterproscan
IPR019926
all species →		Conserved_siteLarge ribosomal subunit protein uL3, conserved siteInterproscan
IPR000597
all species →		FamilyLarge ribosomal subunit protein uL3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11229
all species →		50S RIBOSOMAL PROTEIN L3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN26933-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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