Gene detail

Detailed information of ANN26936-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:10627195...10630817
NR annotation: CAH3024648.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN26936-RA

ATGGTTGATTACCAGAAAGATACCGAGGGCGCCAGAAAAGAGGTGAACGGCTGGGTTGAGGAGAAAACCAAGCAGAAGATTAAGAATTTGATTCCAGAGGGAGTGTTTACCTCACGCACACGGCTGACCCTGGTGAATGCAATTTATTTCAAGGGCTTTTGGCAAAACCAGTTTGAGAAAGAAGCCACTTTTCCCCAGCAATTCTTTGTCTCCGAAAGTGAAAAGGTACAAGTACAGATGATGCACTTAACGACAAAGTTCAAGCATGTTGAAGATGTCGGGGACCTAGGTTGTCAAGTGCTCGAGCTACCCTACCAAGGGGAGGATCTTTCCATGGTTATTCTGTTGCCCCATGACACCCACGGGCTGGCCAAGTTAGAAGAAGGCCTCACCCATAACAAGTTACACAAGGCTATTGAATCTGTATCACAGTCACGCCCCCACAAGGTAGAAGTCGCCCTGCCAAGATTTAAGCTGACACAGCAGTTTCTTCTCAACAATATTCTGGCAAAAATGGGAGTAACAGACATGTTTAGTGAGTCCAACGCTGATTTTTCAGGCATTACACCAGGTCCAGAGAAGATATATGTGTCCCATGTCATTCACAAGGCATTTGTGGAAGTAAATGAGAAGGGCACAGAAGCCGCGGCAGCCACGGGTGTGGCCATGATTGGCTTCGGCATGGCACTGGTGCCAATGAATGCAATCTTTTGTGCCGACCACCCATATCTGTTTATGATTTGTCACAAGAAATCCGGCGCAATTTTGTTTATGGGGCGTGTGTTGAAACCAGAATCAGGCGATGAAGTGAAATTCTCTAAAATGAAAAGGGTAATTGAAGCAAACAACAAATTCTCGGTGGATCTCCACAAAGCTCTCAGAAATGACGCACAATTCGCAGGGAAAAACCTGTTTTATTCACCAAGCAGCCTGAGTATTGCACTTGCCATGACTTCCATGGGAGCAAGAGGCAACACAGCTGTACAGATGAACAAAGCTCTCCACTGGGAAGGATTGCCACAAGATCAACTATGCAATGAAGAGCAACTCTTCCTTAATGCTCTGCAAGAATCAAACGCCGCAGGCAACGAATTGCTGGCCGCCAATCGACTTTTTGTGCAGAAGAACTTTAGTTTGGTACAAAAGTTCGTCGAGGAAACAAAAAAGTTCTTCGCTGCTGAGATAGCATTGGTTGATTACCAGAAAGATACCGAGGGCGCCAGAAAAGAGGTGAACGGCTGGGTTGAGGAGAAAACCAAGCAGAAGATTAAGAATTTAATTCCAGAGGGGGTGTTTACCTCACGCACACGGCTGACCCTGGTGAATGCAATATATTTCAAGGGCTTTTGGCAAAACCAGTTTGAGAAGGAAGCCACTTTTCCCCAGCAATTCTTTGTCTCCGAAAGTGAAAAGGTACAAGTACAAATGATGCACTTAACGGCAAAGTTCAAGCATGTTGAAGATGTTGGGGACCTAGGTTGTCAAGTGCTCGAGCTACCCTACCAAGGGGAGGATCTTTCCATGGTTATTCTGTTGCCCCATGACACCCACGGGCTGGCCAAGATAGAAGAAGGCCTCACCCATAACAAGTTACACAAGGCTATTGAATCCGTATCACAGTCACGCCCCCACAAGGTAGAAGTCTCCCTGCCAAGATTTAAGCTGACACAGCAGTTTCTTCTCAACAATATTCTGGCAAAAATGGGAGCAACAGATATGTTTAGTGAGTTCAATGCTGATTTTTCAGGCATTACACCAGGTCCAGAGAAGATATATGTGTCCCATGTTATTCACAAGGCATTTGTGGAAGTAAATGAGAAGGGCACAGAAGCCGCGGCAGCCACAGGTGTGGCCATGATGGCCCGCATGGCACTGGTACCAATGAATGCAATTTTTTGTGCTGACCACCCATATCTGTTTATGATTTGTCACAAGAAGTCAGGCGCAATTTTGTTTATGGGGCGTGTGTTGAAACCAGAATCAGGCGATGAGTGA

Transcript

ANN26936-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30740	Leukocyte elastase inhibitor OS=Homo sapiens OX=9606 GN=SERPINB1 PE=1 SV=1
Q8VHP7	Leukocyte elastase inhibitor B OS=Mus musculus OX=10090 GN=Serpinb1b PE=1 SV=1
Q1JPB0	Leukocyte elastase inhibitor OS=Bos taurus OX=9913 GN=SERPINB1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000836 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00079 all species →	Serpin	Serpin (serine protease inhibitor)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036186 all species →	Homologous_superfamily	Serpin superfamily	Interproscan
IPR042185 all species →	Homologous_superfamily	Serpin superfamily, domain 2	Interproscan
IPR023796 all species →	Domain	Serpin domain	Interproscan
IPR042178 all species →	Homologous_superfamily	Serpin superfamily, domain 1	Interproscan
IPR000215 all species →	Family	Serpin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11461 all species →	SERINE PROTEASE INHIBITOR, SERPIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004867 all species →	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13963	SERPINB; serpin B	-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.