Gene detail

Detailed information of ANN26942-RA in Montipora grisea

Genomic Location: Scaffold_3026__1_contigs__length_38606:35303...37384
NR annotation: XP_011406105.2, PREDICTED: uncharacterized protein LOC105313960 [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN26942-RA

ATGGATTCTGCGCAAGTGGCCGAAGGCATGCCCATTACAGGCGTGACTCTATATGACAACGGCTACGCGGTCTTCCAGAGGGAGATCACCGTACAGGGCCACGGCAGCACCAACCTCTACTTTCCAGCCAACCACATGAAAAGCGTCCTGGAGTCCCTGCAGTTCCTTGGGAGTGCCGGAAAGAAGGTGGGCAACATTGCCTATGAACCCGTCAAGCCCGTGCCAAGCATTGAGCTAAAGCAGGCGGAGCCTTTGGTGCAGCTTCTCCGCTCTCTCGTTGGTAGTCTCATCCGGATCCAGCAGACAACGGAAGCAAGAACAGAGTTGATTGCAGGTCGGATCCTTGGAGTTGATAGCCTTCATCACACCAAGGTTCAAACAAAAGTGGAACATGTGAGTATCTTGATGCAGGATGAACTCACAATACGCACTGTTCCAATCATGGAGATACGTTCCTTCCATATCGTCGAGAGCCAGGTCCAGCAGGATCTTACATTCTCTCTTGATCTCGTTCGAAACCAAAGCAAGGACAACATGCAGAAGCTGAGTGTCTTCTACAGTGATGTGGAGGGGCCCCAGAAGCTTATTGCCCGCTATGGCTTTCAAGTCAATGAGTGGAAGAGTTCTTATCGCATGACACTCTCTGATCACCCAACAAAGTTCCACCTCAATGGCCTTGCGATTGTCGAGAACACCCTGAACGAGGACTGGAACGATGTCACTCTTACCTTAGTTGTTGGGGCTCCCGCAATTGAAAACAAGCAAGCTTCAGTCACTGATGAAGGTCTCTGGCAGCTCAACATCAAAGCATTGGATGGAAGCCATTTCCACATCCGTGCAAATCCCAAAGATTCTGTGCTTTCCGTGAAGAGCAAAATTGCAAGGAAGAAGGGTATCTCTGCATTGTCCTTTCGTTTAGTTTTTGCTGGGAAACCTGTTGAAGACGGTCGCCTCCTCTCTGATTACACGATCGGGAACAATGCCCAGCTGCATATGGTTAAAGTATCAGACTTGTCTAGCCAACATGCAGGAGCCAGTAGCCAAACCCAGTTTGTCATGGCTGCCCAAAACAACCTTTCCTATTACCCAATTGCTATGCACGTGACAGCCAAAAGGAAGCAAAAGGCTATTGTTCCTCTGCTCCAAGCTGAACTAGAAGGCCAGAAAGTGGTCCTCTATGATGAAACAATCCGCAAGGGTAACCCACTATCTGCTGTTTTATTTGAGAACACCACTGGCCGTACACTTGAGGGAGGTTCACTTCAGATCTCAACCACTGAGGTCTTCCTTGGCCAGGGGAACCTACCAACCATGCACCCAGGGGATGAGTCACCACCCATTCCCTTTGCTGTTGAGCTTGGCTGTGAAGTTGTCAAGGCAGTGGACAGTACGTACCTAAAGCCACATCGTGTTGAGATTGCTTCTGGCACTGTTAGCATCTTCTGCATTCATCGTGAGCGCACACTCTACAAAATCAAGAACAAAACAGAAAAGGAACTTGATTTCCTACTAAATCATCTCTTTCTGGAGGACTATGACCTTGTCCAAAACCCTGATATGGAGGAAGAAGAGCCAGTGGACATCACTGATCGTTTCTACCAGTTTCGCTTGGTCATCCCACCACAAGTCGAGAAGAAGACATTTGCAGTCCGTGAGGAAGTCACTGACATGAAGCAGCATGAGGTTGGGGACGTCAACGAAGAGCTGCTTGATACATGGGTGAAGAAAGATTTGATTGACTCGAGAGTTGAGCATGCCATCCGGAACACGTTTGCCATAAAAAGACAGATGGATGATATTCGAAAGGGTATTTATGAGAAGGAAACAGAAATGCGTGAGGTACGAGATACACAAGAGCATCTGAGAGAAAACATCACAGCCCTCGAACATCATGAGAAGGAAGCTGCTAAGTACATTCAAAGCCTGTCTGCCGAGGAGGACAAGCTGAAAGCCCTGCAGGAAGGTATTCGGAGAGCAAGGCAGCAGAAGAAAGAGCTTGATGCCATGCTGGCTGCCAAAATTGCTGAGATAGAGTTCACAAAGGATATGACTCGGCCTAGTACAGACACTTCTACGGAATAG

Transcript

ANN26942-RA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan