Gene detail

Detailed information of ANN26944-RA in Montipora grisea

Genomic Location: Scaffold_1466__1_contigs__length_54788:8991...15501
NR annotation: KAJ7373842.1, Sister chromatid cohesion protein DCC1 [Desmophyllum pertusum]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN26944-RA

ATGGGTCCCATGCTGTTTTCCCTCAGCATGGACTCTGTTCCTCATGCTCAATCTAGACGGACCTCCGAACAGGTGGACAGTTCAGCCAAAGCTGCTGGGCTGACTGACCCCTGTGGCCCTACACAGCTACTCCACTTCAGTCCACAGGTCAACTCAGAAGACGTGAAACTACTCGAGCTGACCCATGATGTACTGGAAGCTATTCACACTGGACAGAGAGTAGTAATCAGAGGAGACCCCAACGATGATGCAGTCCTCTGTACAGACAATAAAACGTATGACTTGAGGGTAGCCGAGACGTCTAATGCTCTCTTGGTGTTGCCAGACCTCTTGCTTCCCAAGGAACAGAGTTTCAGAGAGTATGAGAACGGAGCTCTGGTTTCCATGGAGGTAACAGCCTGTCTGTCTAACTACTATGAACTGAGACCCTGTCGTCCCAGGGTTGAAAAGTTGAAGCTACTACTAGGCTATTGGAGAGTGCTGGACCTAGATTATAGAGACCATGTGTTTCAGAGTGTTCTCACACTACTAGAGGAGAAAGACTGGAGCTATAGACGTGTACCTCTCAATGGCACTTGCAGCGAGTTGAAGGACCTAGAGCCAAGATTTGCTATTGAGCACTGTCTAATGTGTTATGGCCGGAAGTTAGAGAGTGACAGTGATGATGAAGAAATCTACTATGAGTTGTCAGAGGAAAGGGTATGTCGGTTCTATGCTGAACTCCTGTTGAGGCCGGCTGGAAAATTCAATTACCATGAGTTTATGGAGTCGTGGCAACAGTCAGTTCCTGATGGCATGACCACCAATCTCACACAGTTACAGGGTTTGGCTTTGAGAGATATGAACAGTATTCCACCAGTGATATGGCATTTCCCTGTCTCAGCTCTACCTCAAGAGCCAACTGCAAGATTCCAAAGACTGTTCAGTGCTAGAGAGAAATGGACACAAGCTGAGATAGAACCGTACATCAGTTGTGTTCTCCAGTTCCCACTGGGTCACAGCCAGTCATGCATCCCCTACAATCTCCCTGACACCTCTCGACACTGTGCCAAGGTCTTCACTGAGTGTAGCCATGTCATCCCGGCTAAGAACATCAGTTTCCTAGAGACGGCTGAGTTGATACTCGGTCAAGTTATCAATTTAGCTGAGGTTGGGATAGAGCTTGGATACCTCACACAAACCTGTCTAAGCAGCTTCCTGCCTTTCTACTGTAACCAAGTTTATTCTCTATGTGAGCAATCATCATCACACCGGTACATGCCGACATCACGACCACTTTGCCGTGAAGACTGCAAAGAGGTTATTGGGAATAACTGCACTCTGGAACAGTGGAGCTTTCTTTCTGATGTTATTGAAGGTCGGAGGCAGAGTGGGCTCACTCAGACACCTGCACTAAGGCAGAACTGCATGGACCTGCCAAACTTTGACCCTGGAGACCCCACAAACTGTATCAGAATAGGAGGCACAGAATGTGTCCCTGAGAACTCCAACTCTGATGGTTCTGACAATTTCTTGACTACAGAGATCATTGCTGCCTGTCTTGTGGTGGGAATCTCACTGGTACTAGTGGTCATTTTTGTATTGGTAGTAGGTTGCTGCCGCAAACTCAGGAGCCTTCGAAAGCAGAAGGAAGACAAGGAAGCAGACAGTGAGTATCCAGTGTTTTTTCAAGTAGAAGGCTTTGACAGCCCTGACAGCAAAGGTGCTTATAATCAAGGAACACTGATGATGGGAACGTCAGTTGTGAGAGACGCTCTGCTTGGTGCTAACCCTATGCCTCGTACAGCAACAGTGGTCAAACGGCTTGGGACAAACACATTCCTTAGAATGAATCCAAAACAACGACTCCAGACTCTAGAGATCCCTCATAGCAGCATATGCATCTTGAAAGATACCGGAGAGACAAACTTTGGAAAGACATATCTTGGAGAGGGTACTGGACTGGCAGAGAATGAGTTATCGACCACTGTCTACATCAAGTCACTGCGAGAGAGAGCCTCATCAAAGCTCCGACAGCAATTCTCTACTGAAATGACCTGGGTTTCAGGGTTCAATCACCCAAACGTCTTTGTTTTGTTGGGTGTCTGCAGTAAAGAGGAGCCATGGTACATGGTCTATGAACACTTGGAGTACGGATCACTGAAGGACTTCCTCCAGTCCATCGATTCTGCTTGGTTTGATTTCGAAAAGGTCCTGAATGATGCAACTAGCACATGTGCCTCATCTAACATTCCCATCATTGGAATGGATGACCTGACCAGCATTGGCTGTCAGCTGGCCAATGGGATGGACTACCTAGCCAGTAAGGCCTTTGTGCACAGGGATCTGGCAGCTAGAAACTGCCAGATTGGGCACGGAATGAGAGTGAAAATCTCCAACTTTGGCTTCAGCTACGACCCAAAGTCTAAGGACTACTGCCACCTTAGCTCGGTGAAAAGTGCCACACCTCTTCCACTCCGCTGGCTCGCACCAGAGACCCTCCGCAATGGGAAATTCTCCCTCTACACTGACATCTGGTCCTATGGAGTTCTTCTCTGGGAGGTTTTCTCATTTGGAGCACACCCATACTCAGAGCTTAGTAACCCACATGTCGTCCGACAGATTATGGAGCTTAAGGTCTTGGCACAGCCCGAAAAGTGTCCAGATGGTATTTACAAGGCTATGGTCAAGTGCTGGAGCAAAACACCCTCGGAGAGGCCTTTCTTTGCTGCCACAAGACAGGAATTAAGTGCAGCGTTGGAGGGGCTTGATAGAGACATCAGGAAGCTTTCAAAAGCGCCATCACATCCTCACCTCCTTGAGCAATTAAAGTGA

Transcript

ANN26944-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14AI0	Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV=1
Q9BVC3	Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=2
Q6GMB0	Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004532 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF09724 all species →	Dcc1	Sister chromatid cohesion protein Dcc1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR020067 all species →	Domain	Frizzled domain	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036790 all species →	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR019128 all species →	Family	Sister chromatid cohesion protein Dcc1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0010976 all species →	Biological Process	positive regulation of neuron projection development	Interproscan
GO:0014068 all species →	Biological Process	obsolete positive regulation of phosphatidylinositol 3-kinase signaling	Interproscan
GO:0017147 all species →	Molecular Function	Wnt-protein binding	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007064 all species →	Biological Process	mitotic sister chromatid cohesion	Interproscan
GO:0031390 all species →	Cellular Component	Ctf18 RFC-like complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN26944-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.