Gene detail

Detailed information of ANN26944-RA in Montipora grisea

Genomic Location: Scaffold_1466__1_contigs__length_54788:8991...15501
NR annotation: KAJ7373842.1, Sister chromatid cohesion protein DCC1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN26944-RA

ATGGGTCCCATGCTGTTTTCCCTCAGCATGGACTCTGTTCCTCATGCTCAATCTAGACGGACCTCCGAACAGGTGGACAGTTCAGCCAAAGCTGCTGGGCTGACTGACCCCTGTGGCCCTACACAGCTACTCCACTTCAGTCCACAGGTCAACTCAGAAGACGTGAAACTACTCGAGCTGACCCATGATGTACTGGAAGCTATTCACACTGGACAGAGAGTAGTAATCAGAGGAGACCCCAACGATGATGCAGTCCTCTGTACAGACAATAAAACGTATGACTTGAGGGTAGCCGAGACGTCTAATGCTCTCTTGGTGTTGCCAGACCTCTTGCTTCCCAAGGAACAGAGTTTCAGAGAGTATGAGAACGGAGCTCTGGTTTCCATGGAGGTAACAGCCTGTCTGTCTAACTACTATGAACTGAGACCCTGTCGTCCCAGGGTTGAAAAGTTGAAGCTACTACTAGGCTATTGGAGAGTGCTGGACCTAGATTATAGAGACCATGTGTTTCAGAGTGTTCTCACACTACTAGAGGAGAAAGACTGGAGCTATAGACGTGTACCTCTCAATGGCACTTGCAGCGAGTTGAAGGACCTAGAGCCAAGATTTGCTATTGAGCACTGTCTAATGTGTTATGGCCGGAAGTTAGAGAGTGACAGTGATGATGAAGAAATCTACTATGAGTTGTCAGAGGAAAGGGTATGTCGGTTCTATGCTGAACTCCTGTTGAGGCCGGCTGGAAAATTCAATTACCATGAGTTTATGGAGTCGTGGCAACAGTCAGTTCCTGATGGCATGACCACCAATCTCACACAGTTACAGGGTTTGGCTTTGAGAGATATGAACAGTATTCCACCAGTGATATGGCATTTCCCTGTCTCAGCTCTACCTCAAGAGCCAACTGCAAGATTCCAAAGACTGTTCAGTGCTAGAGAGAAATGGACACAAGCTGAGATAGAACCGTACATCAGTTGTGTTCTCCAGTTCCCACTGGGTCACAGCCAGTCATGCATCCCCTACAATCTCCCTGACACCTCTCGACACTGTGCCAAGGTCTTCACTGAGTGTAGCCATGTCATCCCGGCTAAGAACATCAGTTTCCTAGAGACGGCTGAGTTGATACTCGGTCAAGTTATCAATTTAGCTGAGGTTGGGATAGAGCTTGGATACCTCACACAAACCTGTCTAAGCAGCTTCCTGCCTTTCTACTGTAACCAAGTTTATTCTCTATGTGAGCAATCATCATCACACCGGTACATGCCGACATCACGACCACTTTGCCGTGAAGACTGCAAAGAGGTTATTGGGAATAACTGCACTCTGGAACAGTGGAGCTTTCTTTCTGATGTTATTGAAGGTCGGAGGCAGAGTGGGCTCACTCAGACACCTGCACTAAGGCAGAACTGCATGGACCTGCCAAACTTTGACCCTGGAGACCCCACAAACTGTATCAGAATAGGAGGCACAGAATGTGTCCCTGAGAACTCCAACTCTGATGGTTCTGACAATTTCTTGACTACAGAGATCATTGCTGCCTGTCTTGTGGTGGGAATCTCACTGGTACTAGTGGTCATTTTTGTATTGGTAGTAGGTTGCTGCCGCAAACTCAGGAGCCTTCGAAAGCAGAAGGAAGACAAGGAAGCAGACAGTGAGTATCCAGTGTTTTTTCAAGTAGAAGGCTTTGACAGCCCTGACAGCAAAGGTGCTTATAATCAAGGAACACTGATGATGGGAACGTCAGTTGTGAGAGACGCTCTGCTTGGTGCTAACCCTATGCCTCGTACAGCAACAGTGGTCAAACGGCTTGGGACAAACACATTCCTTAGAATGAATCCAAAACAACGACTCCAGACTCTAGAGATCCCTCATAGCAGCATATGCATCTTGAAAGATACCGGAGAGACAAACTTTGGAAAGACATATCTTGGAGAGGGTACTGGACTGGCAGAGAATGAGTTATCGACCACTGTCTACATCAAGTCACTGCGAGAGAGAGCCTCATCAAAGCTCCGACAGCAATTCTCTACTGAAATGACCTGGGTTTCAGGGTTCAATCACCCAAACGTCTTTGTTTTGTTGGGTGTCTGCAGTAAAGAGGAGCCATGGTACATGGTCTATGAACACTTGGAGTACGGATCACTGAAGGACTTCCTCCAGTCCATCGATTCTGCTTGGTTTGATTTCGAAAAGGTCCTGAATGATGCAACTAGCACATGTGCCTCATCTAACATTCCCATCATTGGAATGGATGACCTGACCAGCATTGGCTGTCAGCTGGCCAATGGGATGGACTACCTAGCCAGTAAGGCCTTTGTGCACAGGGATCTGGCAGCTAGAAACTGCCAGATTGGGCACGGAATGAGAGTGAAAATCTCCAACTTTGGCTTCAGCTACGACCCAAAGTCTAAGGACTACTGCCACCTTAGCTCGGTGAAAAGTGCCACACCTCTTCCACTCCGCTGGCTCGCACCAGAGACCCTCCGCAATGGGAAATTCTCCCTCTACACTGACATCTGGTCCTATGGAGTTCTTCTCTGGGAGGTTTTCTCATTTGGAGCACACCCATACTCAGAGCTTAGTAACCCACATGTCGTCCGACAGATTATGGAGCTTAAGGTCTTGGCACAGCCCGAAAAGTGTCCAGATGGTATTTACAAGGCTATGGTCAAGTGCTGGAGCAAAACACCCTCGGAGAGGCCTTTCTTTGCTGCCACAAGACAGGAATTAAGTGCAGCGTTGGAGGGGCTTGATAGAGACATCAGGAAGCTTTCAAAAGCGCCATCACATCCTCACCTCCTTGAGCAATTAAAGTGA

Transcript

ANN26944-RA

Protein

Uniprot

Uniprot term	Description
Q14AI0	Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV=1
Q9BVC3	Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=2
Q6GMB0	Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF09724	Dcc1	Sister chromatid cohesion protein Dcc1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR019128	Family	Sister chromatid cohesion protein Dcc1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0010976	Biological Process	positive regulation of neuron projection development	Interproscan
GO:0014068	Biological Process	obsolete positive regulation of phosphatidylinositol 3-kinase signaling	Interproscan
GO:0017147	Molecular Function	Wnt-protein binding	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007064	Biological Process	mitotic sister chromatid cohesion	Interproscan
GO:0031390	Cellular Component	Ctf18 RFC-like complex	Interproscan