Gene detail

Detailed information of ANN26948-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:11001317...11002560
NR annotation: KAJ7392595.1, tRNA-specific adenosine deaminase 2 [Desmophyllum pertusum]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z6V5	tRNA-specific adenosine deaminase 2 OS=Homo sapiens OX=9606 GN=ADAT2 PE=1 SV=1
Q6P6J0	tRNA-specific adenosine deaminase 2 OS=Mus musculus OX=10090 GN=Adat2 PE=1 SV=1
Q5E9J7	tRNA-specific adenosine deaminase 2 OS=Bos taurus OX=9913 GN=DEADC1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006470 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14437 all species →	MafB19-deam	MafB19-like deaminase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028883 all species →	Family	tRNA-specific adenosine deaminase	Interproscan
IPR002125 all species →	Domain	Cytidine and deoxycytidylate deaminase domain	Interproscan
IPR016193 all species →	Homologous_superfamily	Cytidine deaminase-like	Interproscan
IPR016192 all species →	Binding_site	APOBEC/CMP deaminase, zinc-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11079 all species →	CYTOSINE DEAMINASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002100 all species →	Biological Process	tRNA wobble adenosine to inosine editing	Interproscan
GO:0008251 all species →	Molecular Function	tRNA-specific adenosine deaminase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0052717 all species →	Molecular Function	tRNA-specific adenosine-34 deaminase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15441	TAD2, ADAT2; tRNA-specific adenosine deaminase 2	EC:3.5.4.-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.