Detailed information of ANN26965-RA in Montipora grisea

Genomic Location: Scaffold_5773__1_contigs__length_28614:14170...16704
NR annotation: CAE7417860.1, thrS [Symbiodinium microadriaticum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C5BSQ1Threonine--tRNA ligase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=thrS PE=3 SV=1
Q21KE0Threonine--tRNA ligase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=thrS PE=3 SV=1
Q0AAL5Threonine--tRNA ligase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=thrS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF02824TGSTGS domainDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF05198IF3_NTranslation initiation factor IF-3, N-terminal domainDomainInterproscan
PF00707IF3_CTranslation initiation factor IF-3, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047246DomainThreonine-tRNA ligase, class IIa, anticodon-binding domainInterproscan
IPR019813Conserved_siteTranslation initiation factor 3, conserved siteInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR001288FamilyTranslation initiation factor 3Interproscan
IPR036788Homologous_superfamilyTranslation initiation factor 3 (IF-3), C-terminal domain superfamilyInterproscan
IPR036787Homologous_superfamilyTranslation initiation factor 3 (IF-3), N-terminal domain superfamilyInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR004095DomainTGSInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR019814DomainTranslation initiation factor 3, N-terminalInterproscan
IPR019815DomainTranslation initiation factor 3, C-terminalInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11451THREONINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Transfer RNA biogenesisko03016deepkoala

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