Detailed information of ANN26987-RA in Montipora grisea

Genomic Location: Scaffold_1585__1_contigs__length_52906:37612...38286
NR annotation: MCG8463537.1, response regulator transcription factor [Xanthomonadales bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I4F9Two-component response regulator PhoP OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=phoP PE=1 SV=1
Q8Z7H2Virulence transcriptional regulatory protein PhoP OS=Salmonella typhi OX=90370 GN=phoP PE=3 SV=1
Q8CXZ9Transcriptional regulatory protein PhoP OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=phoP PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004383 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486
all species →		Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00072
all species →		Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001867
all species →		DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR011006
all species →		Homologous_superfamilyCheY-like superfamilyInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR039420
all species →		FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR001789
all species →		DomainSignal transduction response regulator, receiver domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111
all species →		REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000160
all species →		Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156
all species →		Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976
all species →		Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0032993
all species →		Cellular Componentprotein-DNA complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07660phoP; two-component system, OmpR family, response regulator PhoP-Antimicrobial resistance genesko01504deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP