Detailed information of ANN27008-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:11958546...11972770
NR annotation: CAH3154905.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3ZS28Retinoblastoma-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rbl1 PE=1 SV=4
Q64701Retinoblastoma-like protein 1 OS=Mus musculus OX=10090 GN=Rbl1 PE=1 SV=3
P28749Retinoblastoma-like protein 1 OS=Homo sapiens OX=9606 GN=RBL1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008552 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF11934
all species →		DUF3452Domain of unknown function (DUF3452)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR024599
all species →		DomainRetinoblastoma-associated protein, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33332
all species →		REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN27008-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN27008-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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