Gene detail

Detailed information of ANN27086-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:13343652...13369503
NR annotation: XP_020603032.1, misshapen-like kinase 1 [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN27086-RA

ATGGCGTACGGACTGGACGATATTGATTTAGCTTCCCTGAAGGATCCAGCCGGAATATTTGACTTGGTCGAAGTAGTTGGAAATGGAACTTACGGCCAAGTTCATAAGGGCCGTCACAAGAGGACTGGACAGCTGGCTGCTATCAAGATCATGGATGTTACTGAAGATGAGGAGGAGGAAATCAAACTAGAAATAAATGTTCTCAGAAAGTTTTCTCATCATCGCAATATAGCTACATATTATGGAGCTTTTGTGAAGAAGGGCATACCAGGACAGGAGGATCAGCTATGGCTTGTGATGGAATTCTGTGGAGCAGGCTCCATAACTGACCTAGTGAAAGCCTCAAGAGGAAAAGCATTAAAGGAGGAATGGATTTCATACATTTGTCATGAAGTGCTCAATGGTGTGAGCCATCTTCATCAAAATCATGTTATACACAGAGACATTAAAGGACAGAATGTGTTGTTAACAGACAGTGCAGAGGTGAAATTAGTTGACTTTGGTGTTAGTGCTCAGTTGGACAGAACCATTGGAAGAAGAAACACATTTATTGGCACTCCTTATTGGATGGCACCAGAGGTGATTGCATGTGATGAGCAACCTGACGCTACTTATGACAACAGGTGCGACATGTGGTCTATTGGAATCACTTCGATTGAGATGGCAGAAACACAGCCTCCTCTGTGCGACATGCATCCAATGAGAGCCTTGTTTCTCATCCCGCGGAGTGACCCCCCTCGTCTGAAGTCCAAGAAGGCGTGGTCCAAGAAATTCCACAACTTTGTCAACACCTGTTTAATTAAGGATTATCTAAGAAGACCTACTGCTGATCAATTGTTACAGCATGAGTTCATTCGGGATGCGAGGTCACATGAACGAAAAATAAGGATAGAGTTGAAGGATTTTATTGACAGGATGAAAAAGAAGAAAGCCCCTCCTCCCGACCACGAGGAAGAATTCCAGTATTCTGGCAGTGAGGAGGAAGATGAACAGTTGTTGGCAGGAATGATTGCTGAGGAGATGGGCATTGTCAATGTGCAATCAACTCTGAGAAGAAATCTGACCCTTATGCAAGGAGGGACATTTGGAAGAGGTAATTATCCACCAAGGAAGAGTAGCAGCGGTAGTAGCCCTGAAATGAATCAGAATCATGTTTCACCGCAGTACGCAGGTGCAGCTGGTGGGTATGATAACGATGTGTTCCTGGACACCAGTGTTGACAGCTTTATAACATTAAACACTGACGACACCCTCACAGCATCCAACCATTCTCGGCATCGTTCTGCTTCTTTGGGGGATCAACAAGATGGAGACCTCACTCTAAGGCCACAGCGAGAAGCTCATGATGAAGATGGTGACGAGTATAATACAATGGTTGTAAAAGAAGATGACAATGACTCTGAAGGTAGTGCATCAACTGCCAGCATAGGTGAAGCAAACAGCCCCGCCCGACCCCTGACAAACAACTTGCCAGATGTTCTTCCCACACAACAACAAAAAATAAAGTTTAGTCCCACACTTGATGATTTCAATGCCAATAAAAGGAATCCTACCACTGACGGGCAGTTCCATTGTAAATTTCATGCTGGGATGGAGACCATTCAGAGTATTGAGAAACTCAGAGGCAGCGTCACCACTAGGCATTTTAGCCAGGGTATCATCCACGTAACGTTTGTACAGGTCAGGCATCAGACCATCACGGGAGAGCTTCTCTTCCAGGTGACACATAAAAACATTAGCCATCAGAGGACCAAGAGGGGAGCCCATGGCCACCCCATCAGTCTGTTCGTACAAAAGACCATTGAACTGGAAAAGCTGGTTGGTTGTAGCAATTTCCAAGCGGGTGGAAATGTTGAGCTGGACGTCCACGCTTCTTGGACGCTTCGTGGACGTCCAGCTCAACATTTCCACCCGCTCTTACAGAAAGAAAAAGAGTTGCGCACAGCCTTACGTCAAATTCTACCTGAAGAGATCGCTAACTCGCTTTCTCCGAAGAGTTCCAGATTGTCACACTTGTATGGCCTTCCGAAGACCCATAAAGCCACACTGAGTATGAGACCCATTTTATCAGCAACTGGCGCCTACAATTACAATCTCGCCAAATGGCTCGAAGAGAAACTTAAGCCACTCTCCATCAATGACTACACAATCACTGATGCCTTTGCTTTTGCTGATGAAATCCGTACCATTTCCGTGAATGAGGATGACATCTTAGTCTCCTATGATGTGACATCACTTTTCACCAACGTACCTTTGAGTGAGACGATTAACATCCTAGTCCACAAAGCGTTCACTAACGATTGGTTCAACAAGACCTACGGCCTTAACTTGCAGAAGGATCAGCTTGCCAAATTACTGGAAATTGCTACAACCAACCAGCTTTTCCAGTTCAATGGTCTTTTGTACGAACAGACTGATGGGGTGGCCATGGGCTCCCCTCTTGGTCCTCTGATGGCTGATGTTTTTATGTGTCACCTGGAAGAGAAGCTCTCCCGTGATGGTCTGATGCCTGACCTGTACAAACGTTACGTGGATGATACCCTGGCTAAAATGCCTAGTGGTGACGCTGCCTCTGAGTTTCTCAATACTCTGAATGGTCTCCATCCCAGCATGAAATTTACAATGGAACTGCCCGTCAGTGGTAGGATTCCTTTTATTGGCATTGAAATCATCAAGTGTGGGACTAAACTTGAAACTCAAGTTTACAGGAAACAAACGAACAGTGACTTACTCTTGCATTACCATAGCCATACCGACAAACGATACAAGGTGTCTTTAGTGAAAACAATGTTACATCGCGCGTACGCTCTATGTTCCACAACAGAAGCTTTCAATTTAGAATGTAACAAATTGCGCTCAATTTTCAGTCGCCTAGATTATCCAAGGGCTCTCATAGATTCCATCATTAGTGATTTTCTTCGTAATGTATCGGAACAGGCAGCGGAAGAGAAGCCTGAAGGCGGTCGTAAGATCAGAATTATCCTTCCTTTTAAGGATCAAGTAGCTGCCAATGCGGTTCGCAGGCAATTTAACGACCTAAGTAATAAGATTGGCCCCATATTGCAGCCAGTTTTTGTTAGTAGGAAATTAGAACATGATCTTAAGCCTAGGGAAGTTAAGCCGTCGATTGTGAATCAGCAATGCGTTGTTTACTATTTTTCATGTGATCTGTGCGATGCAGATTATGTCGGCTATACAGCCAGACACCTTTTTCAACGCGTTGCTGAGCACAAGAACTCGGCAATTGGCAAACATTTTCTTGAAGCTCACGGGAGCAAACACCTATTGAATCAGGGCCATTTTAACATCTTGAGAAAGTGTCAGAGCAAATTTGATTGTTTGAAAGCTGAACTTGAGCGGAAGTCATCAGATGACTCAATTGCTTCATCAACTACAGCTCAAGACACAAAGAAAGACAGGAAATTTTCTAAACAACGAAGCTTTGGTTTTGGGCGGCCATCACAAGCTCCTTCCGAGGTGTCAGTAAATCTGGCGCCAGACAGGGCATCAAATGCTAGTCTAGATGACATGGGGATGCCGCAGATCAGAAAATACAAGTACAAATTTCGTACAGAAATCTTGTGTGGAGCTCTGTGGGGTGTTAATCTCATTGTTGGTACAGAAACCGGTTTGTATTTGTTGGACCGCAGTGGATATGGAAAAGTTTTCCAACTGATTTCTAGACGCAGGTTTCAGCAAATTGATGTTCTAGAAGGAATAAACGTGCTTATTTCCATTAGTGGCAAACAGAACAAACTCCGTGTGTATTATTTGTCCTGGCTAAAAGCAAAAATTCTTAAAGGAGAAGAGGCTGACCATCACCGAAGGCAGCGAGGTTACACAACAGTTGGTGATCTTGAAGGATGTGTTCACTATAAAGTTGTAAATTTTCATCGCATTAAATTCCTGGCCATTGCGACGGAAAACAAGATTGAAGTTTATGCGTGGGCACCAAAACCTTATCACAAGTTTATGGCGTTTAAGTCCTTCCCAGACCTGGTGCACAGACCACTGATGCTTAATGTCACGATAGAGGCAGAAAACAGCAGACTGAAAGTTTGTTACTCCTCTGAAATAGGTTTTCATGCCGTGGATTTGGATTCGGCCTCAGTTAATGATTTGTTTATACCCAGTCAGCTTCAAGAGAAGTTACAGCCTCACGCCATTATTCCTTTACCAAGTTCGAGTGGTTTGGAACTTCTTCTCTGTTTCAACAATGAAGGCGTGTATGTCAATACGAATGGTGATCTTGTGAGACACGCTATGCTACAGTGGGGAGAAACGCCTTACGCTATTGCACACATAGGTTCCGGACAGATCATGGGCTGGGGTGAGAAAGCCATCGAGGTTCGGTCCGTGGAGACAGGTCTTTTGGACGGAGTGTTCATGCATAAACGAGCACAGACATTTAGATTCCTCTGTGAAAGAAACGAAAAGCCTGTTTTACACGTACGACGCAAGCATAAGCATAAACACAAGCATAAGCACAAGAAACCTACGTGTAAATCGGTGCGACGCAAGCATAAGCGCCTTGTGCTTACGCTTGTGCTTATGCTTTCGTCGTCCCGGTTTACACGTACGACGCAACGACGCAAGCATAAGCACAAGCACAAGGAAAGGAAACTGAAAAACAGTGACAAGTTGTCAGCGTACATTCTAGTTACTCATGCGTTGCCATTTGGAAAATGGCGGCAGCAAATTTTTATGCTTCTGCGCTTGCGTATGTCACCTTATGCTTATGCTTATCGCACGTGTAAACATCCTTGTGCTTATGCTTATGCTTGCGTTGTACGTGTAAACCAGGCTTTACTCGCTTTAAAGGATTTTAGCCTGGAGATTGATCCCAAGGATATTGCATACGAGGGACATCTGAGAATAGACAAGTGA

Transcript

ANN27086-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P83510	Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=2
Q9JM52	Misshapen-like kinase 1 OS=Mus musculus OX=10090 GN=Mink1 PE=1 SV=3
Q9UKE5	TRAF2 and NCK-interacting protein kinase OS=Homo sapiens OX=9606 GN=TNIK PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004022 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR051700 all species →	Family	STE20 Ser/Thr Protein Kinase	Interproscan
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47096 all species →	MISSHAPEN LIKE KINASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN27086-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.