Genomic Location: Scaffold_13__1_contigs__length_39802057:13528591...13542442
NR annotation: CAH3023670.1, unnamed protein product [Porites evermanni]
| CDS | |||||
| ANN27098-RA | |||||
| Transcript |
| ANN27098-RA |
| Protein |
| ANN27098-RA |
| Uniprot term | Description |
|---|---|
| Q58HI1 | Proline-, glutamic acid- and leucine-rich protein 1 OS=Xenopus laevis OX=8355 GN=pelp1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08167 | RIX1 | rRNA processing/ribosome biogenesis | Repeat | Interproscan |
| PF08166 | PELP1_HEAT | PELP1, middle domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012583 | Domain | Pre-rRNA-processing protein RIX1, N-terminal | Interproscan |
| IPR012980 | Domain | PELP1, middle domain | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR34105 | PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K16913 | PELP1, MNAR; proline-, glutamic acid- and leucine-rich protein 1 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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