Detailed information of ANN27110-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:14031623...14035290
NR annotation: XP_015772885.1, PREDICTED: zinc finger protein 480-like isoform X2 [Acropora digitifera]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011487 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13912
all species →		zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24381
all species →		ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0001227
all species →		Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Transcription factorsko03000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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