Detailed information of ANN27117-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:14162637...14174801
NR annotation: CAH3158557.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q26603Homeobox protein SMOX-4 (Fragment) OS=Schistosoma mansoni OX=6183 GN=SMOX-4 PE=2 SV=1
Q801E1Ventral anterior homeobox 2 OS=Danio rerio OX=7955 GN=vax2 PE=2 SV=1
Q28601Homeobox protein Hox-C9 (Fragment) OS=Ovis aries OX=9940 GN=HOXC9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

TOP