Gene detail

Detailed information of ANN27153-RA in Montipora grisea

Genomic Location: Scaffold_149__1_contigs__length_181826:97016...100094
NR annotation: MYC74254.1, site-specific DNA-methyltransferase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN27153-RA

ATGCAAGCGGCTGACGGCGGTAGCATTGTCAATATCGCTTCTGTCAATGGACTCATCGGATTACAGGCGATCCACGCATATTCTGCTGCAAAAGGTGGCGTTATCGCTTTGACCCGATCGATGGCAGTCGCGCACGGTAAGGACAACATCCGTATCAACTGTATCTGTCCCGGAACGATTCAAACCGAAGTTTGGGAACCGATGATTGAACGTAACCCACAGATCCTCGACGAAATCACGCCGTGGTATCCGTTAGGACGGATTGGGCAACCCGTTGACATCGCAAATGCCGCGCTTTTCCTCGCATCCGATGAAGCCAGTTTTGCAACGGGAGCGGTCTTCGTCATTGATGGTGGGTTGACAGCAGGAAAGGAGAAAAAACAGGTGGCGTTTACGGATTTCACATCCATTGCACAGGTGCAAGAAACCTTTGACATCAAGTATACTGAAGAAGACTACATCCCGTACGATGCTGATATTGAACCTTCTCCGGCGTTTTTAGAGGAGTTCGCGTTTAGCCAGCAATATATTGATGTGTTTGCATCGGAAACGTCCCGTTGTGAGAATGTTATCTATCCGATTCTCAGGGATGTTTACAAGAAATATGCCGACCGTTTTTCGTTGTGGAGCCATAAATCTATTGCTTACGACGCACAACTCAGTGGTACCCCGGACTACCTCATTTCAACGAAATCAGCGTTAGGCAAAACAGTGCTTGGAACCCCTATCATCGTTGTTGTTGAGGCGAAACGAAACGACTTCATAGAGGGCTGGGGACAGTGTTTAGCGGAATTGGTCGCCGTTCAGCGAATTAACGATGATGTGAAGCCTGTTTATGGTATTGTAACAGATGGTGAGATGTGGCAATTCGCACGGAAAGGACACGACTTTATGAGAAAAGAAAAATTTGATCAAAAACTGATGAAACTCCTTGAATCCAACCCTGATTTTGTTGATTGTGCAGGAGAACTCCACCGTGCCAAGGTCAGAGAACGCGCATGGAAACTAGACCGCGACCTTATCAAATTGCTGCTAAAGGACAAAGAGGTTGAGACAAAATTCTTTAAGGAAATTGAGGGACGTTGGATTTTTGATAACAATACTTTCGTTGATTATATCACGGACAAAAATTTCTTTGCTGACTCTTATACCAAGTTTCGTAATAAGATTGGTTTGAACATTGATGGAAAATATCTCCAGGAGCGCGGCGAAGTCGCACTTGTTTGGCCCTACAAGGATTGCGTTTTGGAGGGTGGACAAACACGTGAAGAAGAAAAACGCAAAGAAATTTTCTTCAATGAAATGCTGGCACCCGACGAAATTAACCGGATGTTCGATCCGAAAGTCCTCACTAACTGGAAACGCTACACTGTTACTGGTGAACAAGAGGTAACGAACATCCAATGTGATGAGGATGGTCTCATTCGCGAGAATCTTATCATTAAAGGTAATAACCTCATCGCCCTCCACACTCTCAAAGAGCAGTTTCGCGAAAAGGTCAAACTGATTTACATTGATCCGCCGTATAACACGGGAAATGATTCATTTGGCTATAACGATAGTTTTAATCATTCGACATGGCTAACGTTTGAAAAAAATCGACTCGAAGCAGCTAAATGCTTTCTTTCAAATAGTGGTAGTATTTGGATTAGCATTGACGAACGAGAATTTGCATACTTGAAGATTCTCTGTGATGAAATATTTGGGCGTGAAAACCACATTTCCACAGTAACGGTAAAGGTCAAAGATCCAGCAGGTGTCGGGCAGCAAGCACCTATTTTTGATATTTGTGAGTATCTGTTAGTATATGCCAAAGATATTAAACAGTTTAAGGAAAACTTGCCAGAGTTTGTTGATACTTCTCACTTTACCGAAAAAGCGAATGGTTATAGAAATTTGATTGTCGAATATGGAAAGCCAAGGTTGGTTAAAGAAATAGAGCGAAAAAATGTAGGTTTAGTCAAGATTTTTGAATGTGAAGATTATAAGATTGCTGATGCAAACAAATTGCCTTTTGAGGAGTATGTTGAGAAGCGTAAGTCGATAGCCGCCGACTACAACCCAAGTGGTGGAATGATACTCGCGATTCGGGGACAACTTCCGGCAAAAGGATTATCATTCATTGAATATACGCCAACAAAAGGAAAGATGGCTGGTAGAAAAAGTAGAGTCTATTTTATGAATCGCAGAATTTTATCATTTCTATCAGAGATATTGATAGAAATAGAGGGCGATGTGTATCGGAAATCAAAACTGACAAATTTGTGGAACATTCCAAATGCCAGTTTGCATCTTGAAGGTGGTGTTGAGTTTAAGAATGGCAAAAAACCCGAAGTATTGATTAAAAAAATACTTAGTTTTGGCACAGTTGAGGGCGATCTGATTATGGATTTTCACGTTGGGAGCGGTACAGCTGCCGCAGTTTCCCACAAGATGAACCGCCAATGGATTGCGATTGAACAGATGGATTACGTGGAAACCATCACGACGGAACGCGTAAAAAAGGTGATTGCTGGTGAGCAGGGCGGCATCTCCAGATCCGTCAACTGGCAGGGCGGTGGCGATTTCATCTACTGCAGACTCAAAGAGTACAACGAAGTTTTCATGAAGCGAATCCAACCCGCAGAATCTTGCGAGGAACTCTTGGACATCTATCGCGATATGTCAAAAGATTCTGTTCTGAACTGGTATGTTAATCCTCAAAAACCGGAGGAGGCAGAAGAACATTTTATCGCTATCAATGACGTTGAGAAACAGAAGCAGTTGCTTGCAGAATTGCTAGATAAGAACCAATTGTATGTCCATCTTTCTGAAATAGAGGATGAGACGTTTCAGGTCAGTGAAGCAGACAAAGTACTCAATAAGGCCTTTTATGGGGATGTGCACTAA

Transcript

ANN27153-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P71366	Probable type III restriction-modification enzyme HindVI Mod subunit OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=mod PE=3 SV=2
P12364	Type III restriction-modification enzyme EcoP15I Mod subunit OS=Escherichia coli OX=562 GN=mod PE=1 SV=2
P08763	Type III restriction-modification enzyme EcoPI Mod subunit OS=Escherichia phage P1 OX=2886926 GN=mod PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0032603 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561 all species →	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan
PF01555 all species →	N6_N4_Mtase	DNA methylase	Family	Interproscan
PF12564 all species →	TypeIII_RM_meth	Type III restriction/modification enzyme methylation subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR002941 all species →	Domain	DNA methylase N-4/N-6	Interproscan
IPR002052 all species →	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR022221 all species →	Domain	Type III restriction/modification enzyme methylation subunit	Interproscan
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24321 all species →	DEHYDROGENASES, SHORT CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0008170 all species →	Molecular Function	N-methyltransferase activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0032259 all species →	Biological Process	methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN27153-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.