Detailed information of ANN27158-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:14914142...14921264
NR annotation: CAH3020660.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5I0C3Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1
Q96RQ3Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=MCCC1 PE=1 SV=3
Q99MR8Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001401 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00364
all species →		Biotin_lipoylBiotin-requiring enzymeDomainInterproscan
PF02785
all species →		Biotin_carb_CBiotin carboxylase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005482
all species →		DomainBiotin carboxylase, C-terminalInterproscan
IPR001882
all species →		Binding_siteBiotin-binding siteInterproscan
IPR000089
all species →		DomainBiotin/lipoyl attachmentInterproscan
IPR011054
all species →		Homologous_superfamilyRudiment single hybrid motifInterproscan
IPR050856
all species →		FamilyBiotin-dependent Carboxylase ComplexInterproscan
IPR011764
all species →		DomainBiotin carboxylation domainInterproscan
IPR011053
all species →		Homologous_superfamilySingle hybrid motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18866
all species →		CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004485
all species →		Molecular Functionmethylcrotonoyl-CoA carboxylase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN27158-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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