Gene detail

Detailed information of ANN27160-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:14948747...14949905
NR annotation: XP_020620234.1, balbiani ring protein 3-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000521 (this species only)

Pfam domain

No Pfam domain signature was detected for ANN27160-RA. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR029034 all species →	Homologous_superfamily	Cystine-knot cytokine	Interproscan
IPR050507 all species →	Family	Platelet-derived/Vascular endothelial growth factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12025 all species →	VASCULAR ENDOTHELIAL GROWTH FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001666 all species →	Biological Process	response to hypoxia	Interproscan
GO:0001934 all species →	Biological Process	positive regulation of protein phosphorylation	Interproscan
GO:0001938 all species →	Biological Process	positive regulation of endothelial cell proliferation	Interproscan
GO:0002040 all species →	Biological Process	sprouting angiogenesis	Interproscan
GO:0005172 all species →	Molecular Function	vascular endothelial growth factor receptor binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008083 all species →	Molecular Function	growth factor activity	Interproscan
GO:0038084 all species →	Biological Process	vascular endothelial growth factor signaling pathway	Interproscan
GO:0042056 all species →	Molecular Function	chemoattractant activity	Interproscan
GO:0045766 all species →	Biological Process	positive regulation of angiogenesis	Interproscan
GO:0048010 all species →	Biological Process	vascular endothelial growth factor receptor signaling pathway	Interproscan
GO:0050930 all species →	Biological Process	induction of positive chemotaxis	Interproscan
GO:0060754 all species →	Biological Process	positive regulation of mast cell chemotaxis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN27160-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.