Gene detail

Detailed information of ANN27200-RA in Montipora grisea

Genomic Location: Scaffold_219__1_contigs__length_143444:116345...116980
NR annotation: HIC80510.1, 50S ribosomal protein L9 [Kiloniellaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2W5H3	Large ribosomal subunit protein bL9 OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=rplI PE=3 SV=1
Q0BPY8	Large ribosomal subunit protein bL9 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=rplI PE=3 SV=1
A4WS83	Large ribosomal subunit protein bL9 OS=Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=rplI PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009593 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01281 all species →	Ribosomal_L9_N	Ribosomal protein L9, N-terminal domain	Domain	Interproscan
PF03948 all species →	Ribosomal_L9_C	Ribosomal protein L9, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000244 all species →	Family	Large ribosomal subunit protein bL9	Interproscan
IPR036935 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Interproscan
IPR036791 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Interproscan
IPR020594 all species →	Family	Large ribosomal subunit protein bL9, bacteria/chloroplast	Interproscan
IPR020070 all species →	Domain	Large ribosomal subunit protein bL9, N-terminal	Interproscan
IPR020069 all species →	Domain	Large ribosomal subunit protein bL9, C-terminal	Interproscan
IPR009027 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21368 all species →	50S RIBOSOMAL PROTEIN L9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02939	RP-L9, MRPL9, rplI; large subunit ribosomal protein L9	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.