Gene detail

Detailed information of ANN27244-RA in Montipora grisea

Genomic Location: Scaffold_616__1_contigs__length_83369:40089...40823
NR annotation: MCB9751680.1, sigma-54-dependent Fis family transcriptional regulator [Myxococcales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9HU19	C4-dicarboxylate transport transcriptional regulatory protein DctD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dctD PE=3 SV=1
P12626	Nitrogen fixation protein AnfA OS=Azotobacter vinelandii OX=354 GN=anfA PE=4 SV=1
P12627	Nitrogen fixation protein VnfA OS=Azotobacter vinelandii OX=354 GN=vnfA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan