Gene detail

Detailed information of ANN27265-RA in Montipora grisea

Genomic Location: Scaffold_198__1_contigs__length_152383:139826...142676
NR annotation: WP_089373336.1, molecular chaperone HtpG [Dokdonia pacifica]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN27265-RA

ATGGCAGACGAAAACAACACTCAAAAGAAAAAAGGTCAAATTAATATAGAACTGGATGAAGCAATTGCACAAGGAACATACTCAAACCTTGCAATAATTAATCATTCTGTATCAGAATTTGTAGTTGACTTTGTAAATATTATGCCTGGAACCCCTAAAAGCAAAGTGAAATCCAGAATTATTCTTACGCCACAACATGCAAAACGACTAGCTAAAGCTTTGGCAGAAAATATTAAGCGTTTTGAACATGCACATGGTGAGATTAAAGACTATGAGAAGCAACCTATCCCTCTGAATTTTGGACCGACAGGACAAGCTGATCATGAAATATTCCTTAGAGAGCTTATTTCTAATGCAACAGATGCAACACTTAAATTAAAGCATCTTACAAGTATAGGAGAATCTAAAGTAGAATACGGGAATCCTATTATAGAAGTAAAAGTAGATAAAGAAGGAAAGAAGCTTCATATCATAGATCAAGGCCTTGGTATGACTGCAGATGAAGTAGAAAAATACATCAATCAAGTGGCGTTTTCAGGTGCCGAAGAATTCTTAAATAAATATGAAGATTCTGCAAAAGATGCTGGGATTATTGGACATTTTGGTCTAGGATTCTATTCTGCATTTATGGTAGCTGAAAAAGTAGAGATTATTACAAAATCTCATAAAGATGAACCTGCTGCACATTGGAGTTGTGATGGATCACCAGAATTTACACTTGTAGAAGCAGACAAAACAGAAAGAGGAACAGAGATTATCCTTCATATCGCAGAAGATAGTACTGAATTCCTTGAAGATGCAAGAATTACTGAGTTATTGACGAAGTATAATAAGTTTATGCCAGTACCAATCAAGTTTGGTATGAAAACTGAAACACTTCCAAAACCAGAAGATGCAAAAGAAGAAGATCCAGCACCTACTCAAGAAGTAGATAATATTATCAATAACCCTTCTCCAGCTTGGACAAAACAACCTACAGATTTAGAAGAAGAAGATTATAAAAACTTCTATCGTGAGTTGTATCCAATGCAATTTGAAGAACCTCTCTTTAACATTCACCTTAATGTAGACTATCCTTTTAACCTTACGGGAATATTATATTTCCCTAAGCTTGGACAGGATATGAATGTTCAAAAAGACCGTATCCAGTTATATCAAAATCAGGTATTTGTTACAGATAATGTAGAAGGTATTGTTCCTGACTTTTTAACAATGCTACGAGGTGTAATTGACTCTCCAGATATTCCGCTTAATGTATCTCGTAGTTATTTACAAGCAGATGGTGCTGTAAAGAAAATATCAGGATACATTACTCGTAAAGTAGCCGATAAATTAAAATCTCTATTTAATAATGATCGTGAAGATTTCGAAAAGAAATGGAATGATATAAAAGTAGTGATTGAATATGGAATGCTTTCTGAAGAAAAATTCTTTGAAAAAGCAGATAAATTTGCACTATACCCAACAGTAGACGATACATACATGACTTGGGAAGAACTTGAAGCAAAAATCAAGGATTCTCAAACCGATAAGGATAACAAATTGGTAGTACTTTATGCAAGTGATAAAGATGCACAACATGCGTATATCCAAAGTGCTAAAGACAAAGGATATGAGGTATTGTTATTAGACTCCCCTATCGTAAGTCACTTAATTCAAAAACTAGAAACTAGTAAAGAAAACGTTTCTTTTGTACGTGTAGATGGAGATCATGTAGATAACTTAATCAAGAAGGAAGAAGAACAAATCAGTAAACTTTCTGATGAAGAAAAAGAATCTCTAAAAACTGTAATCACTGAAGCGATTGGAGATACTTCATATACTGTTCAAATGGAAGCTATGGATAGTAATGCAGCGCCATTTATAATCACGCAACCTGAGTTTATGCGTCGTATGAAAGAGATGCAGCAAACTGGTGGAGGTGGTGGTATGTTTGGTATGGGTAATATGCCAGACATGTATAACCTTGTAGTAAATGCAAATCACGAATTGGTTTCTGAGATCATGAATACCAAAACAGCAAAGAAAAAAGAGCGTTTAATTAAACAATCTTTCGATTTAGCTAAGCTTTCTCAAAACCTATTAAAAGGAGAAGAACTTACAGCGTTTATTCAACGTTCGTATGGGATGATTAAATAA

Transcript

ANN27265-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8A9B8	Chaperone protein HtpG OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=htpG PE=3 SV=1
P0CJ84	Chaperone protein htpG OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=htpG PE=3 SV=1
E1WNR6	Chaperone protein htpG OS=Bacteroides fragilis (strain 638R) OX=862962 GN=htpG PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0042601 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00183 all species →	HSP90	Hsp90 protein	Family	Interproscan
PF11950 all species →	DUF3467	Protein of unknown function (DUF3467)	Family	Interproscan
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR020575 all species →	Domain	Heat shock protein Hsp90, N-terminal	Interproscan
IPR001404 all species →	Family	Heat shock protein Hsp90 family	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR021857 all species →	Family	Protein of unknown function DUF3467	Interproscan
IPR037196 all species →	Homologous_superfamily	HSP90, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528 all species →	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006974 all species →	Biological Process	DNA damage response	Interproscan
GO:0009408 all species →	Biological Process	response to heat	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04079	HSP90A, htpG; molecular chaperone HtpG	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.