Detailed information of ANN27276-RA in Montipora grisea

Genomic Location: Scaffold_7509__1_contigs__length_24714:17735...21253
NR annotation: UCH41792.1, MAG: carbamoyl-phosphate synthase large subunit [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P58943Carbamoyl phosphate synthase large chain OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=carB PE=3 SV=1
P58942Carbamoyl phosphate synthase large chain OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=carB PE=3 SV=1
P38100Carbamoyl phosphate synthase large chain OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=carB PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02142MGSMGS-like domainDomainInterproscan
PF02787CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF03449GreA_GreB_NTranscription elongation factor, N-terminalDomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF01272GreA_GreBTranscription elongation factor, GreA/GreB, C-termDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018151Conserved_siteTranscription elongation factor, GreA/GreB, conserved siteInterproscan
IPR006275FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR011607DomainMethylglyoxal synthase-like domainInterproscan
IPR028624FamilyTranscription elongation factor GreA/GreBInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR005480DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR022691DomainTranscription elongation factor, GreA/GreB, N-terminalInterproscan
IPR036953Homologous_superfamilyTranscription elongation factor GreA/GreB, C-terminal domain superfamilyInterproscan
IPR036805Homologous_superfamilyTranscription elongation factor, GreA/GreB, N-terminal domain superfamilyInterproscan
IPR036897Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR036914Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR005483DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR001437DomainTranscription elongation factor, GreA/GreB, C-terminalInterproscan
IPR033937DomainCarbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domainInterproscan
IPR006359FamilyTranscription elongation factor GreAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0070063Molecular FunctionRNA polymerase bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004088Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006541Biological Processglutamine metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01955carB, CPA2; carbamoyl-phosphate synthase large subunitEC:6.3.5.5
Alanine, aspartate and glutamate metabolismko00250deepkoala

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