Gene detail

Detailed information of ANN27308-RA in Montipora grisea

Genomic Location: Scaffold_271__1_contigs__length_126973:76859...79239
NR annotation: MCH2350636.1, heavy metal translocating P-type ATPase [Pseudomonadales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN27308-RA

ATGAATACTCCCCAACACGCACCTCGGCATTTGGAACTTGCCATTGAAGGTATGACGTGTGCCGCGTGCGTCGCAAGGCTTGAGAAAGCGTTTGCGCGAACCGATGGTATCTCGAACGCACTTGTAAACCTGCCTTTGGAAAAGGCCTCGATCGAGTTTGACGCGCGGGTGGTCGATCTTGATGCTGTTACGGATGTAGTGCATCGCACCGGATTTAGTGTCAGTGAAGATCGTCGCATCTTCGGTATCGAGAATTTAGGAGACGATTTGTCTGCGCAGCAACTTCGCGCTGCTTTATTAGATACGCCAGGTGTGTGTGCGGTTGATGTCTACGTCGAGCGCTGGCAGGTCGCAGTCACCGTCATAACGCACGTCGTCACTGACGCAGAAATAGTCGAATGTGCGATGCGCCATGGTGTCAATCTCGTTGCGCCGCAGTCCATTGACGACCAACTTACAAAGCTTCGTGCTTTGGAATCCGAGAAAAAGCTGCTCATCGTCTCGTCTCTCCTTACACTGCCTCTCGTGTTGCAAATGCTTGCGCAGTTCGCCGGGTGGGAAGAGTTTCACTTAATGCCGACCGCCGAAGTTTTTCTAGCTACGCCTATACAGGTTGTGATTGGCGCGAAGTTCTATCGTGGGGCACTGAACGCTTTACGAGGCGGTAGCGCGAACATGGATGTGCTGGTCGCATTAGGCACCACTGCCGCCTACCTATACAGTTGGTATTTGATGATTCAACTTGGCGAGGCGGCCGAAGGCGAGCTGTATTTTGAAGCTTCAGCCGTGATCATCACGCTTGTTCTGCTAGGCAAATACATTGAGACCAAAGCCAAGTTCAGCACGACGGCGGCCGTTCGCGACTTAATTCAGCTACGTCCTGCTACGACAACTGTACGTCTTCCCAGCGACGAAGAAACCACTAAACGCGTATCAACGCTTGTTGCGGGCGACATTTGTGCGACCGTTTTCCGGCCGGACGGAGTAGTTCTCGAAGGAGAGGCAAATGTCGATGAAGCGCTGGTTACGGGCGAAAGCACGGGTGTGCATAAAACCGTTGGAGCGAAGATTTTCGAAGGTGCAATCAATGTCGATGGCATCTTGGTCGTCCAAACGACAGCGGTCGGTGCCGACTCCACCATTCAAAAAATCGTGAAATTGGTTGAGAGCGCTCAACTTGGCAAGACGACCGCCCAGCGACTAGTCGATAAAGTCAGCGGTGTTTTTGTACCAATCGTCATGCTGCTGGCACTCGCAACGACAGCAGTATGGATTTTGGTTACGGGTAACTATGAGCAAGCATTGGTCAGCGGCGTTTGCGTTTTAGTTATTGCGTGTCCGTGTGCGTTGGGTTTAGCAACGCCCACCGCAATCATGACAGGCACGGGCATTGCTGCCAAAGCGGGAGTTTTGTATCGCGATGTCGCGACTCTTGAACACGCACATCGGATTCGGCGAGTTGTATTCGACAAAACCGGGACGCTCACGGAGGGACGACCGGAGATTACGCAGATCACGTGTTTCAATGGAACCGATCGAGCAATTGCGCTGCAACGAGCAGCGTCGTTGCAATACGGTAGCACGCACCCGATCGCGTCGGCATTTCTGCGAGCCGCCGAAGAGGCAGAACTACCGCTTCTGGATGTATTGAACTTTAAGAATTGGATTGCGCAAGGGGTCGAGGGAACCGTATCAGGTTCTCATTGCTTGCTTGGCAATTCAGCGTTGTTGGAGCTACACCGCATCCCGCTTCCTGATACTGTCGGGACGATCGGAGAAAGTACCTTATGGTTTGTTGAAAATCAGCAGATACGAGCGAATTTTGAGATTCGAGATACGTCGATTTACTATCTGGCGATGCGCAAACCATCGCATCGAATTGGCGATGAGTTGGAAATCGATCATGCCCGCGGTGGACTGCTCCCGAACGATAAAGCATCCTACGTTCGCGAACTAATTCAGAACGAGATTCCAACAGCCATGGTTGGCGATGGCATTAACGATGCGCCTGCGCTGGCTGCAGCGTCTGTTGGCATGGCGATGAGTTCCGGAACCGATGTTGCAATGGACGTCGCGCCTGTCACATTGATGCGACCGGATCCTCGATTGGTTGGAACGGCACTAAAAATCAGCCGCGTCACGTTTAAGAAGATCCGCCAAAACTTATTCTGGGCATTCTTGTACAACGTTGCTGCCTTGCCGCTTGCCGCGTTAGGTGTTCTGACGCCAACGGTAGCCGGAGCAGCCATGGCGTTTTCGAGTGTATGTGTTGTACTAAATTCGTTGCACCTGCGACACAAGCGATTGACCTGA

Transcript

ANN27308-RA

Protein

Uniprot

Uniprot term	Description
Q4L970	Copper-exporting P-type ATPase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=copA PE=3 SV=1
Q4A0G1	Copper-exporting P-type ATPase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=copA PE=3 SV=1
Q5HL56	Copper-exporting P-type ATPase OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=copA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00403	HMA	Heavy-metal-associated domain	Domain	Interproscan
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006121	Domain	Heavy metal-associated domain, HMA	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR036163	Homologous_superfamily	Heavy metal-associated domain superfamily	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43520	ATP7, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0043682	Molecular Function	P-type divalent copper transporter activity	Interproscan
GO:0055070	Biological Process	copper ion homeostasis	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17686	copA, ctpA, ATP7; P-type Cu+ transporter	EC:7.2.2.8	Platinum drug resistance	ko01524	deepkoala