Detailed information of ANN27408-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:21857814...21873796
NR annotation: CAH3041077.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4A3R3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Sus scrofa OX=9823 GN=DMBT1 PE=2 SV=1
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
A1L0T3Scavenger receptor cysteine-rich domain-containing group B protein OS=Mus musculus OX=10090 GN=Ssc4d PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000099 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →
SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772
all species →
Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR017448
all species →
DomainSRCR-like domainInterproscan
IPR001190
all species →
DomainSRCR domainInterproscan
IPR050912
all species →
FamilyLysyl oxidase-like proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817
all species →
LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0004720
all species →
Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan
GO:0018057
all species →
Biological Processpeptidyl-lysine oxidationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN27408-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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