Gene detail

Detailed information of ANN27463-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:22935032...22953920
NR annotation: XP_029181164.2, elongation factor G, mitochondrial-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7RR04	Elongation factor G, mitochondrial OS=Nematostella vectensis OX=45351 GN=v1g236547 PE=3 SV=1
A5PKR8	Elongation factor G, mitochondrial OS=Xenopus laevis OX=8355 GN=gfm1 PE=2 SV=1
Q8K0D5	Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001970 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03764 all species →	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF14492 all species →	EFG_III	Elongation Factor G, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005517 all species →	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR009022 all species →	Domain	Elongation factor G, domain III	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR047872 all species →	Domain	Elongation factor G, domain IV	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR041095 all species →	Domain	Elongation Factor G, domain II	Interproscan
IPR035649 all species →	Domain	EFG, domain V	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43636 all species →	ELONGATION FACTOR G, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0070125 all species →	Biological Process	mitochondrial translational elongation	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN27463-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.