Detailed information of ANN27527-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:24480275...24485029
NR annotation: XP_015771114.1, PREDICTED: hemicentin-2-like isoform X15 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
Q60625Intercellular adhesion molecule 5 OS=Mus musculus OX=10090 GN=Icam5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051116FamilyCell Surface Receptors and Adhesion MoleculesInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11973CELL SURFACE GLYCOPROTEIN MUC18-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan

TOP