Genomic Location: Scaffold_627__1_contigs__length_82767:45285...47661
NR annotation: MYD96415.1, valine--tRNA ligase [Gammaproteobacteria bacterium]
| CDS | |||||
| ANN27582-RA | |||||
| Transcript |
| ANN27582-RA |
| Protein |
| ANN27582-RA |
| Uniprot term | Description |
|---|---|
| Q606C1 | Valine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=valS PE=3 SV=1 |
| Q48MF2 | Valine--tRNA ligase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=valS PE=3 SV=1 |
| Q4ZXI0 | Valine--tRNA ligase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=valS PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08264 | Anticodon_1 | Anticodon-binding domain of tRNA ligase | Domain | Interproscan |
| PF00133 | tRNA-synt_1 | tRNA synthetases class I (I, L, M and V) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR009008 | Homologous_superfamily | Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | Interproscan |
| IPR009080 | Homologous_superfamily | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding | Interproscan |
| IPR002303 | Family | Valine-tRNA ligase | Interproscan |
| IPR013155 | Domain | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding | Interproscan |
| IPR033705 | Domain | Valyl tRNA synthetase, anticodon-binding domain | Interproscan |
| IPR001412 | Conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | Interproscan |
| IPR002300 | Domain | Aminoacyl-tRNA synthetase, class Ia | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11946 | VALYL-TRNA SYNTHETASES | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002161 | Molecular Function | aminoacyl-tRNA editing activity | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0004832 | Molecular Function | valine-tRNA ligase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006438 | Biological Process | valyl-tRNA aminoacylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01873 | VARS, valS; valyl-tRNA synthetase | EC:6.1.1.9 | Transfer RNA biogenesis | ko03016 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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