Gene detail

Detailed information of ANN27617-RA in Montipora grisea

Genomic Location: Scaffold_204__1_contigs__length_151211:23563...26193
NR annotation: MXY26997.1, ATP-binding cassette domain-containing protein [Candidatus Poribacteria bacterium]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN27617-RA

ATGAAATCTTTATCGTCATTGATCGTGTCGAACTTGTGGATCAAGAAAAAGCCGATTTACGGAAGCGGTGGAGTTAGCACTCCTACAAAGTGGTGGGAAAAAATAGAACGTGGAAAAACAACAGGCCGGCATTTCCTTAGCGAACACGCGATATGTCGTTCATGCGGCAACAACTTTGGGCAATTGACACCACGCCACTTCTCGTTTAACAACAAAGTGGGAGCTTGCGATTTCTGTGATGGCGTGTGTCAACCTCAAGAGCGACACATTCATCACTTCACATTCATACTTCACCTGAATTTGAAGCCGAAGTACTACGCCAAATCCAAACGCGACTCCAGTGTCTTGGAAGATATTGGTCTCGGCTATCTGGCGTTAGACCGGGGCGCACCGACGCTTTCCGGTGGCGAAATGCGTAGAATCCAGCTCGCGAGCCAACTCGGTAGCGGTCTCACCGGTGTAACCTTATATTCTCGACGAACCGAGCATCGGCTTACACCCCGCGGCGACCAAGAACGCCTCATAGCAGCGCTCAAGGAACTCCGGCGATATTGGGAACAGCGTCCTCGTCGCAAAGGCGGAGGTGAGATTGTCGCTATCGGTACACCGGATACCTTCACAAATGGTGACACTCCGGTCCGAGACACCGATAAAAACACATCCGCCAAATCTTTGACGCAAGCTTATCTTTCCAACGAAGTGGAGATTCAGGTTCCGAGTACTCGGCGTGAAGGCACAGGCAAACAGTTAGCAATATTCGGGGCGAAAACGAATAATCTCAAAGACATTGATGTTGAGATTCCACTCGGAACGCTCACCTGTGTCACCGGGGTCTCAGGATGCGGGAAGAGTTCGCTCGTTGAAGGCACACTAAAACCTGCCCTTGAGAGTCGGAGTTCTATCAAAACGGGTGATCCCAAGGACCGGCGTTATACCCATTATTTCAGCGATGGTCACCGAGAACCGATATATAACGACTATGGTCTACCGGAATATGAAACCATCCGGGGTGTTAGCCATATCAAACGCCTCATTAACGTAGACCAGAAGGCGATCGGAGAGACACCTCGCTCCAATCCAGCAACCTATACAGACCTCTTCACGAAAATCCGTGAACTTTTCGCTGAGCAACACGATGCCAAAATGCGTGGGTATAGTATGGTTTCAACCTTGCACAGGGGCAGTGCCATGTATGTGAGGGACACCGTTTCAATCGCATCGAAATGCATTTCCTTCCCGATGTGTGGATGCCGTGTGAGACGTGTAATAGCACCGGCTATAATACGGATCCGTTACAAGGGGAAAAATATCGCCGAAGTTTTAGAGATGACAGTAGACGAAGCATTGGCATTCTTCACCGAAAGTTCACGTATCTGCCGGACGCTCCAGATGTTAACGGATGTTGGACTCGGTTATATAGAATTGGGACAATCAGCGACGACACTTTCCGGTGGTGAGGCGCAGCGCGTCAAACTTGCAAAAGAATTGGCACGTCGGCAAACGGGTTCAACCCTCTATATCATGGACGAACCGACGACAGGACTCCACTTTGACGACATCCAGAAACTCCTCAAGGTGCTGAACCGACTCGTTGATGCCGGCAACACGATTATCGCTGTCGAACATAACATCGACGTTATCAAATCCGCAGACTGGATCATCGACTTGGGACCGGAGGGCAGTAAAGGTGGCGGAGAAGTCGTTGCGATGGGCACGCCAGAGGAGGTCGCGTCGGTACAAGAGTCCCACACTGCGCGTTTCTTACGCGAGATTCCAGATTACTATCAGATCTTAGAGGTCGAGCGGGATGCTACCGCTCGCGAAATAAAGAAAGCCTATCGGAAACTCGCAAAACGCTACCATCCCGATAAAAATCCGGAGCGGACCGCTTTTGCGGAAAAGATGTTCCGCGAAGTCTGTAATGCTTATAACACGCTCCAAAACAGAAAACGAAAATCTGACTATGATCGGACGCTACAGACGATCGAACGGCAGCGGAAATCACATGAAGTTTATCTTGACAGGCTCAGTAGACTCAATCAAACCTATGCCAAGTTGGAATTGCTGTTGCAAGCACTGCTCCATCACAATTATGAAACCGGCGTTTCTATGTATGAGCAGCTGCAGTACCGCTCTCAGGAGATTGGAAGGAGTTGCGCATTGACGATTTCCTGA

Transcript

ANN27617-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O26543	UvrABC system protein A OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=uvrA PE=3 SV=1
Q88YI7	UvrABC system protein A OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=uvrA PE=3 SV=1
Q99Y84	UvrABC system protein A OS=Streptococcus pyogenes serotype M1 OX=301447 GN=uvrA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007512 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43152 all species →	UVRABC SYSTEM PROTEIN A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN27617-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.