Gene detail

Detailed information of ANN27651-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:27505741...27510936
NR annotation: CAH3024674.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NX65	Programmed cell death protein 10 OS=Rattus norvegicus OX=10116 GN=Pdcd10 PE=2 SV=1
Q5ZIV5	Programmed cell death protein 10 OS=Gallus gallus OX=9031 GN=PDCD10 PE=2 SV=1
Q8VE70	Programmed cell death protein 10 OS=Mus musculus OX=10090 GN=Pdcd10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007267 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20929 all species →	PDCD10_N	Programmed cell death protein 10, dimerisation domain	Domain	Interproscan
PF06840 all species →	PDC10_C	Programmed cell death protein 10, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053750 all species →	Homologous_superfamily	Programmed Cell Death 10 Homolog	Interproscan
IPR009652 all species →	Family	Programmed cell death protein 10	Interproscan
IPR048288 all species →	Domain	Programmed cell death protein 10, dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13250 all species →	TF-1 CELL APOPTOSIS RELATED PROTEIN-15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0043406 all species →	Biological Process	positive regulation of MAP kinase activity	Interproscan
GO:0090443 all species →	Cellular Component	FAR/SIN/STRIPAK complex	Interproscan
GO:1903358 all species →	Biological Process	regulation of Golgi organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18269	PDCD10, CCM3; programmed cell death protein 10	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.