Gene detail

Detailed information of ANN27696-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:28358127...28373257
NR annotation: CAH3105915.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN27696-RA

ATGGCTTCTGCTCCGCCGTCACTTGCATCCACCAAGGAGAAAACGAATTATGCTCTCCTGTGCCGCCTTCTGGTGTCTGTGGGATCCCAGGCCCTTAAGGACTCATTTGATCAAATCCACCCCCCAGCAGATCTGCCTGGCAATTTAGCACATCCTCCAGCACATCCTATACTGCAATCCCTCAGAAAAAAGAGAATCCTTAATCCTACACAATGGGGCAAGCTGTATCCTATCATCTCCTCATCTGTGTCATCAACCAGCTTTGACATGACGCTTCTGATAACGCTGTTGATGAATATCTGTAACTTGAGACCTCCACCAGCTGGCTGGGACAATCTTCCGTCTGCAGATGATACTACTCTTGAAGCCAACATAGCTAGGTTGAGGTTCTACAGGAACAAAGTCTATGGTTATGCCAGCCAGGCGTCGGTGGATGATCCAACATTTGAAAGATGCTGGCAGGACATTAGAAATGTACTGGTAGGTCTGGGAGATGGAGCAAGTTATTTGAATGCTATCAATCGACTCAAGACTGAGCGCATGGATTCTGATATTGAGGAACACTTCCAAGAACAGCTGAAGGCGTGGAAAAAAGATGACGATGAAATAGGAGACAGACTGGATGAAATGGAGGCTGTGCAAAAGAAATGGAAGGGAGATAAAGACAATGGAAACCGCGATATTGGAGATGTTGAAGGGTTGGAAGCTCAATGGAAGAAGAAACGTTTACCACATAATGAAGACAGCCCTCCAAGACTCAGTTTTGAGCTTCCAAAGCCAAGGGACCTTCCAAAGACAAGTAAGCAATGGAGCGATGCTGAACTCCTGATTGACACTCTGTTATTGACCGCGAAAGACTGCGAGTTCTTCAGCTGTTTTGCCTATCTGGATAAGCCTCTTAAGTGTTACCTCAGAGAGATTGGTTACGTGTACTTTGGTGCCATGGATAAAGGTGAGCAGGAAAAGCTGAAAATTGCGATAATAAAATTCGCCGAAGGTTTTTTAGACCGTTCCGTGACAATCGTACATGCAGTCAGGATCCTGCAACCTAAAGCTGTATTTTCTGTGGGCGTCTGCAGTGGTTTAGATCCTGAGAAAGCCAAACTGGGAGATATAATTGTACCTTCCGAGTTAACAACACCTAGCTTTAGAGCTCCCGTTAGCAGAAATATCGTCAACTTCATCAGACATGCAGCTGATGGCTGGATTCCACCTATGGAAGGGTTAGATGGACAAGAAGTGAAAGTGCACAGTGAAGGTGATATTCTGAGCCATCCAGACATTATTCAGCAGTATCCTGAAGCCTTAGCCGTTGACACGAATGGTGAAGATGTTTTTGTAGCAGCTTACGAGATGAATATAAAATGGCTGATAGTGAAGGGTATTGCCAGTTACGGAGATCTCAGTGAGTCTTCAACTGATGAGTGGAAGTCTTTTGCCAGTACTATGGCGGCCTCCTTTGTTGCACACATTTTATGCGACCCTGTTTTTTTCCGAGATTGGCCGCTCCACAACGCAGATTTGATTCCCGCGTATGTTCGAGCTGGAGGGGAGGAAGCGCTTGCGGCTTACAACAGAGCTCTTGAGACTGGTTGGACATATGATAGGCGTGTCAAAGTTTTACTGGTTGGTCAAGACCGTGTTGGCAAAACGAGCCTCAGTAAAAATCTAAGAGGCGAACCATTTGATGAATCTGAACCCAGCACAGAAGGAGTGACCATGATTCCCCCTGTCATGGATGCTGGAACTGATGCTTGGACAAATCCCGCTCATCTTAAAGGCACAAATATATTCGATCACAAGATGGCTGCAAAAATCACTGATTTGCTGTCCAGCAAGCTTCCAGAGTTATCGGCCGAAAGTCCGATGGGAACTGTTGAAGCTGAAGACCTAGATCCCATGTCAGAGGAACTGGTCAGAGAAGATGCTGGTGTAGGAAACCCTCCAGTGAGCCGACACGCCCAACGTCAAAACATTCAGCTGGAAAACGTGGAAGAAAATCTGAAGCAAAGGGAACCGTTTCGTGCTGCCCAAAAGAAGGAACTTGAAGTGCCTGAAGGTGTTACCTCTATTTTAAAAAAAGTGGAGAATAGCGAAGTTGAAGTTGACCAAGGTGACAAAATTTGGACAGTCATTTGGGACTTTGCAGGTCAAGACCTCTTTCGTGCCATACATCCCATTTTTATGTCCCCAGAAGACATCTATTTACTAGTCTTTAATCTTAAAAAGAGGCTGACTAAAAGAGCAAAGTGTCGAGTAAATGTAAATGGCACAGAACACACTGTAAGGGCCCGTGATTGTGAGGATACTAACTTGGATCACTTGCTGAGATGGATGGACTTGATACACTCTTTAGAGAAGAGTTATCAAAATGAGAAGTCGACATCTCAATCGCCACGTGCCAATCCACCGGTTATACTTGTGGGCACCCACGCAGATTGTGTTTCAGACCCAAGCAAAGAAATGCAATGCGTAGTTAGGGAATGCTCAAGGGTTCTTGCGGTATTCGCTGATCACATCGTCAAGCATTTACCGGTTGATAATACAAAGGCTGGTGAGTCAGCAGACAAGCCACATCAGGAGGACATTACAACGTTGCGAAAAGAGATTCTAGATACGGTCGAAAAAATGCCACATACAAAGAAAGTGATCCCCCTGCAATGGCATCGAGTTGAGAAAGAGATAAGCAAGAAAATCTGGCAAGACAAGAAGTACCTCCAAGAGAAAACGTTTGAAAAGGACATTGTGTCGCTTTACTGTACATTTGACCACGAGGGCGATTTTGGCGAACTTTTACATTTCCTGCATTCCCGTGGTACAATAATTTACCATAAACATGCTGACGACTATGACGGTCTGGTTGTCTTGGATCCCCAGTGGCTTATCAACGTCATCGGCGAAATTATAAAAGTGGCACCCAATGATGACGATGAAATTTGGCTAATACAAGATCGCGAAGTATTAGGTGATGAAGGAATGCTTAGCAGACGGTTGCTTGATCACGCCTGCCAAAAACAGAACCTTGATCCCATTAAAGGCTCTTTGGTCTCCTTGATGGAAAAGTTCAACCTGATATTGAAATGGCCATCAACCGAAAGTGAAGATTCGCCCATCCTCGTCCCATGTATGCTGACAACTAACGCCAAGGAAGAAAATACAGTGTATGAGATGACGAGTAACTGCACTGCGCCAGTATACCTCACTTTTGTGAATACCAACTATGTCCCGAGTGGGCTTTTCTGTCGACTAGTTGTACTCATTGGAAAATGGCTGTCACCGAAGCATCGTAATGAGTATAGTCTACACGCGGACGCGGCCAAGTTTGCCCTCGGTAAGGACGGCCATTTCCTCTGTTTGGTGTGCTACAAAACCGTCATCAAGATTTATATCAAGGATCCCCCCAATAAGGGCCCATCTGAGCCTATGTCTTCTTCAGAGCATTGCATGAACGTTTTGTGTCATTTAATGGCATTCTTAGAAGAACTGAAGAAAGAGTGTCACTGGCTCAGTTCAATGACCACCCAGATGTGTGTTCGATGCACAATCTGTCTAGAAGAACATGGTGATGATGCCAGGCGCTGCATGAGGCACAATAAGACGGCATGTCTTCGCCATGACTGTGCACACTACATTCCATTGGAATCGAAAGTCCTGTGCTGTGAGCCAGAGCGCCCTCTTCAACTGGATAAACTGCGAACCTGGATTGAGGCTTTCAACAAATGTAAAGAGACAGGCAAGCCTGGTACATCTTCTGAAAATGAGAGTTCAGCTACGAAGAGAAATTTTTCCGGTGGTACATGTTGCACGATTACTCCGGCTAAACAGAGGAAACTTGCCTGTACAGTTAAAGAGGGCAGTCCGTCGGATAGAGAATTGCATTGTCTTGCTGGGATGATTGCTGACAAATGGCGTCCAGTTGGGCGTCGACTTGGCTTTGAGGAATGGGAGCTGACTTTATTTCATAAAGACAATGAAGAATACAAAGAGAAAGCATATGCTATGCTGTTGGCATGGAAACATAAAAAAGGCGGGGGCGCGACTTACCAAGTTTTAAAGGAGGCATTGTGTGATGAGGAACATGTGGGTCGTACAGATTTAGCAGAAAAATTTTGTTACTAA

Transcript

ANN27696-RA

Protein

Uniprot

Uniprot term	Description
Q6XHB2	Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum OX=44689 GN=roco4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR000488	Domain	Death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47679	PROTEIN TORNADO 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan