Gene detail

Detailed information of ANN27767-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:30148230...30153143
NR annotation: CAH3176878.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN27767-RA

ATGACATTAGGTGCTTTTAATCCAAATGAATTTATTAACGGACTTCGACAACAGTACAAAATCCATGAAGGATGGCTTGCACCCTTTCCGTGGTGTGAAGAGTTTCGATTCCATCTTAAGAACACATTCACCAGGCTCAAAATGGTCACTGACGAAATTGTTAACTTGTCTGACATCTTTAAACCACACGAAGAAAACCCAAGGCCGAGAACAGTATTAATCGAAGGAAACCCTGCCATGGGAAAAACAACATACTGCAAGAAGCTTGCATACGACTGGGCCACTAAGAAACGAGAAGAAGAAGAAGGTTGTTTTCCGAAATTCGAAGTAGTTCTGATGCTGAAATGTCGTGATATCAAGTTTGACCTTTGGGAGGCCATTGATGATCAACTTTTACCTTTAGATATGAGAGAAGAAGAGAGGGAGAAAATCTTCGAGTTTCTTCGCCACAACCAGGCAAAGGTGTTACTGATTCTTGACGGATTGGATGAGTTGCCCACCGGCAAATTACCGATGTTTAAAGAACTCATTCAAGGCATAATCCTTCCAAAATGTCACATAGTAGCTACAGCACAGCACAAGGCTGGGATTAAGGTACGGGAATGCTGCGACACCCTGCTGGTGATCGAGGGATTTACAATAGGGGATGCCAGAGAGTTTATATTCAAGTATTTTAAATCTATGCAGAATTGGGCCGAAAGGCTCTTAGACAAGATTCAGTCCGACGAAAAGTTAAGTGGCCTGACAGTAAATCCTTTGAACATAGCACTTCTTTGTGTTCTTTGTGATGACTTCAAAGGTATTTTTCCAGAAAGTAGAACTCAACTGTTCGTACAAATGGTACAGTGTGTCCTCAGGAGATACAGGACAAAGAAAGGATTACCAGAATCCCACCAAGACCTTACTGAAGTTTACAAAACTGAATTGAAACAACTTGGATTAATAGCCTTGAATGGTTTGCATAACGATAACATGTACTTTGAGGACAATCAGTTTCAAAATCAAAGCGGCGAGCTCCCTGGATTCGGATTACTGTCTGTCGACCCTGGAAGCAGCAAACGAAGACCAAGTCTGTGCTATGGCTTTCTTCACAAGAATTTCCAGGAACTGTTCGCAGCCTTTTATCTCTGTTGTCAGCTTCTTGATGGAGAAATTAGTCCTGACAGCTTAATTGCCGACAGCAGATATTTTGACGAGCTAAAACAAGTGATTCTGTTCGCATGCGGCTTGTTAGCTCTGCAGTGCAAAGAAACAGCAGCTGCCCTTATGAAGAGTATAACAATTCAAGTCAACAATGGAAAGAGCCGTGATTTCGTTGTTGCATTGGAGTGCATTAGCGAATCTAAGAACATAGAGGGTGATTTATACCAGGCATTGGAAGGTGTTGTTGGTTCGCTTCTTGACCTTCATGCAGTTGCTTTTTCAGACGGCCATGCTGCTTCACTGGCTGAAGTTATCAAACGAAATTCAACCCTCACAGTGCTGAATTTGTCTTACAATCGTATTGGCGATGAAGGTGTAGCCGCACTGGCTGAAGCAATCAAAACAAATTCAACCCTCACAGTGCTGAATTTGTCTTACAATCGTATTGGCGATGAAGGTGTAGCCGCACTGGCTGAAGCAATGAAAACAAATTCAATGCTTACAGAGCTGAATTTGTCTGGCAATCGTAATATTGGTGATGAAGGTGTTGCCGCACTGGCTGAAGCAATGAAAACAAATTCAACCCTTACAGAGCTGAATTTGTCACACTGTTTGATTGGTGATGATGGTGTTGCCGCAGTGGCTGAAGCAATCAAAACAAGTTCGACGCTTACAAAGCTGAATTTGTCTGGCAATCGTATTGGTGGTAATGGTGCTGCCGCCCTGGTTGAAGCAATGAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCTGACACTAGCATTGGTGGTGAAGGTGTCACCGCACTGGCTGAAGCAATTAAAACAAATTCACCGCTTTCAGAACTGAATTTGTCTGGCAATGGTATTGGTGATCAAGGTGTTGCCGCACTGGCTGAAGCAATGAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCATACTGTTCGATTGGTGATGATGGTGTTGCCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAAAGCTGGATTTGTATGGCAATCGTATTGGTGGTAATGGTGCTGCCGTCCTGGTTGAAACAATGAAAACAAATTCACCGTTTACAGAGCTGAATTTGTCTCGCAATCGTATTGGTGGTAATGGTGTTGCCGCCCTGGCTGAAGCAATGAAAACAAATTCAACGCTTACAGAGATGAATTTGTCTGGCAATTGGATTGGTGATGATGATGTTGCCGTACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAAAGCTGAATTTGTGTGACAATATAATTGGTCGCAATGGTGTTGCCGCACTAGCTAAAGCAGTCAAAACAAATTCAAAGCTTACACAGCTGAATTTGTTTGGCAATAGTACTGGTGCCGACAATGTCGTCGCACTGGCTGACGCAATAAAAACAAACTTAACGCTTACAGAGCTGAATTTGTCTGGCAATCGTATTGGTGGTAATGGTGTTGCCGCCCTGGCCGAGACAATAAAAAAAAATTCAACGCTTACAGAGATGAATTTCTCTCGCTGTGAGATTCGTGATGATGGTTTTGTCGCACTGGCTAAAGCAATCAAAACAAATTCAACGCTTACAAAGCTGAATTTATCTGACTGTCACTGGATTGGTGGTTATTGTGTTGACGCACTGGCTGAAGCAATCAAAACAAATGCAACGCTTACAAAGCTGATTTTGTCTAGCTGTGGGATTGATGATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTCACTGTGGGATTGATGATGATGGTGTTGTCGCACTGGCCAAAGCAATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTTGGATTCATCATGATGGTGTTGTCGCACTGGCTAAAGCAATCAAAATAAATTCAACGCTTACAGAGCTGAATTTGTCTGACAGCGGGATTGATGATGATGGTGTTGTCGCACTGGCTGAAGCCATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTAAAGCAATCAAAATAAATTCAACGCTTACAGAGCTGAATTTGTCTGACAGTGGGAGTGATGATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAAAGCTGAATTTGTCTGACTGTAGGATTCATCATGATGGTGTTGCCGCACTGGCTAAAGCAATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTAAAGCAATCAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCTGACAGTGGGAGTGATGATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAATAAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAATAAATTCAACGCTTACAGAGCTGAATTTGTCTGACAGTGGGAGTGATGATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACGAATTCAACGCTTACAGAGCTGAATTTGTCTGACTGTGGGATTCATCATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAATAAATTCAACGCTTACAGAGCTGAATTTGTCTGACAGTGGGAGTGATGATGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACGAATTCAACGCTTACAAAGCTGAATTTGTCTGACTGTAGGATTCATCATGATGGTGTTGCCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAGAGCTGAATTTGTCTCACTGTCAGATTCGTGGTGATGGTGTTGTCGCACTGGCTGAAGCAATCAAAACAAATTCAACGCTTACAAAGCTGAATTTGTCTGACTGTAGGATTCATGATGATGGTGTTGCCGCAGTGGCTAAAGCAATCAAAACAAATTCAACGCTTACAGAGCTGAATTCTTCTGACTGTTGGATTGGTGATGATGGCGGTGCCACACTGGCTAAAGCTATCTTAACAAAATCAACACTTACAAAGTTAGATTTGTTTGGGAAAGGTAATTAA

Transcript

ANN27767-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027038	Family	Ran GTPase-activating protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24113	RAN GTPASE-ACTIVATING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan