Gene detail

Detailed information of ANN27770-RA in Montipora grisea

Genomic Location: Scaffold_3884__1_contigs__length_34144:7208...7675
NR annotation: NKC00090.1, 50S ribosomal protein L17 [Pseudomonadales bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6W366	Large ribosomal subunit protein bL17 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=rplQ PE=3 SV=1
C1DKN9	Large ribosomal subunit protein bL17 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=rplQ PE=3 SV=1
B4RT54	Large ribosomal subunit protein bL17 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rplQ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004864 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01196 all species →	Ribosomal_L17	Ribosomal protein L17	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000456 all species →	Family	Large ribosomal subunit protein bL17	Interproscan
IPR036373 all species →	Homologous_superfamily	Large ribosomal subunit protein bL17 superfamily	Interproscan
IPR047859 all species →	Conserved_site	Large ribosomal subunit protein bL17, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14413 all species →	RIBOSOMAL PROTEIN L17	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02879	RP-L17, MRPL17, rplQ; large subunit ribosomal protein L17	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.