Gene detail

Detailed information of ANN27863-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:33019436...33028536
NR annotation: XP_015749779.1, PREDICTED: PCI domain-containing protein 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5JVF3	PCI domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PCID2 PE=1 SV=2
Q8BFV2	PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1
Q2TBN6	PCI domain-containing protein 2 OS=Bos taurus OX=9913 GN=PCID2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR045114	Family	Csn12 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12732	UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000973	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016973	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0070390	Cellular Component	transcription export complex 2	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23801	PCID2, THP1; nuclear mRNA export protein PCID2/THP1	-	Messenger RNA biogenesis	ko03019	deepkoala