Detailed information of ANN27901-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:33839160...33853524
NR annotation: PFX21776.1, hypothetical protein AWC38_SpisGene13730 [Stylophora pistillata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VA42Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Xenopus tropicalis OX=8364 GN=mindy4 PE=2 SV=1
A8MYZ0Inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B OS=Homo sapiens OX=9606 GN=MINDY4B PE=3 SV=3
Q9H8M7Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Homo sapiens OX=9606 GN=MINDY3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000085 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13898
all species →
MINDY-3_4_CDDeubiquitinating enzyme MINDY-3/4, conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000305
all species →
DomainGIY-YIG endonucleaseInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR025257
all species →
DomainDeubiquitinating enzyme MINDY-3/4, conserved domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301
all species →
REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN27901-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN27901-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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