Detailed information of ANN27964-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:35077799...35091783
NR annotation: XP_027054917.1, transforming growth factor beta regulator 1-like [Pocillopora damicornis]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3YBR2Transforming growth factor beta regulator 1 OS=Homo sapiens OX=9606 GN=TBRG1 PE=1 SV=1
Q66IH2Transforming growth factor beta regulator 1 OS=Xenopus tropicalis OX=8364 GN=tbrg1 PE=2 SV=1
Q5PQK8Transforming growth factor beta regulator 1 OS=Rattus norvegicus OX=10116 GN=Tbrg1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05964
all species →		FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965
all species →		FYRCF/Y rich C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040092
all species →		FamilyTransforming growth factor beta regulator 1Interproscan
IPR003888
all species →		Conserved_siteFY-rich, N-terminalInterproscan
IPR003889
all species →		Conserved_siteFY-rich, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22715
all species →		TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0051726
all species →		Biological Processregulation of cell cycleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN27964-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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