Detailed information of ANN28002-RA in Montipora grisea

Genomic Location: Scaffold_429__1_contigs__length_97020:46123...47106
NR annotation: MCB9753440.1, hydroxymethylbilane synthase [Myxococcales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C6DHC2Porphobilinogen deaminase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=hemC PE=3 SV=1
Q6CZG3Porphobilinogen deaminase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=hemC PE=3 SV=1
A5UU37Porphobilinogen deaminase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01749hemC, HMBS; hydroxymethylbilane synthaseEC:2.5.1.61
Porphyrin metabolismko00860deepkoala

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