Detailed information of ANN28016-RA in Montipora grisea

Genomic Location: Scaffold_2618__1_contigs__length_41391:29213...30285
NR annotation: WP_171632245.1, MULTISPECIES: vitamin B12-dependent ribonucleotide reductase [unclassified Ruegeria]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q89MB9Vitamin B12-dependent ribonucleotide reductase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=nrdJ PE=3 SV=1
Q8UEM4Vitamin B12-dependent ribonucleotide reductase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=nrdJ PE=3 SV=1
Q72S00Vitamin B12-dependent ribonucleotide reductase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=nrdJ PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0016128 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02867
all species →		Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF08471
all species →		Ribonuc_red_2_NClass II vitamin B12-dependent ribonucleotide reductaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050862
all species →		FamilyRibonucleoside diphosphate reductase class-2Interproscan
IPR000788
all species →		DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR013678
all species →		DomainRibonucleotide reductase class II vitamin B12-dependent, N-terminal domainInterproscan
IPR029072
all species →		Homologous_superfamilyYebC-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43371
all species →		VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004748
all species →		Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0050897
all species →		Molecular Functioncobalt ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28016-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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