Gene detail

Detailed information of ANN28088-RA in Montipora grisea

Genomic Location: Scaffold_180__1_contigs__length_162044:5440...7929
NR annotation: NBC19130.1, endopeptidase La [Bacteroidota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN28088-RA

ATGAGCATGTTTGCCTTTAGCCTAGCAGAGAGCGAGGACCGGGAGCAGAGTATCCCGCTACCAACAGCGGCGGATGAGAAAGCAATGAATCGGCAGGAGGTGCCGACCTCACTGCCGATTCTGGCCTTGCGCAACACAGTGCTCTTCCCCGGCGTCGTCTTACCCATTACGATAGGACGAGACACTTCACTCCGACTGGTAAAGTACGCGTGTGAAGCCGATCGCTTGTTGGGTGTGGTGGCTCAGCGTGAGCTTGAGACGGAATCTCCTACTCCAGAGGACCTGTACACGGTTGGAACTGTGGCCTCCATCCTGAAGCTCATCAAGATGCCCGATGGCTCGAAGAGCATGGTCATTCAGGGGAAGCGCCGGTTCAAGATCAACGAATACATACAGCAAAAGCCGTTCTTCAAAGCCAGAGTGGAGGCATTGCCAGAAACTCTGGATGAAAAGGAGACCATTCAGCTGGAAGCCCTGATCCGTTCCATAAAGGGCCTTGCGGTAGAGATCACCAATCTGTCTCCCAACCTTCCCAGTGAAGCTGCGGAAGCTATTGAGAGCATCGATTCTCCCTCATTTCTGATCCACTTTATTGCCTCAAACCTGCAGATAGAGGTCAATGAAAAACAGGCGCTCTTGGAAAAGCTTTCGCTGGTGAGTCGGGCCACTATGGTTATGGAGCACTTGACCAAGGAGATTCAAGTGCTTCGACTATCGGAAGAGATTCGCACGCGCATGCGTAGCGAGGTAGATCAGCAGCAACGCGAGTTCTTCCTGCGGCAGCAAATGAAGGCTATAAAGGAAGAGTTGGGCGATGATGATGGCTCATCCGATCTGGATGGGCTTCTTGAGCGTGCCCAAGAAAAGGACTTGCCTGAACACGCACAGAAGGTTTTTGAGAAGGAACTCAAGAAACTACGGAGGACCAATCCGGCCGCCCCGGATTATGCGGTGACCCGCAATTATGTCGATTGGATACTGGACCTGCCTTGGACGGAGTACACGAAGGATCAACTCGATATTGCAAACGCAGAAGTAGTGCTTGAGGAAGATCATTACGGTCTAGAGAAAGTCAAGAAACGGATATTGGAGTATCTGGCCGTGCTAAAACTCAAGGGGGATATGAAAGCTCCCATTCTATGTTTTTACGGGCCTCCCGGTGTGGGTAAGACCAGCCTTGGAAAGAGTATAGCTCGTGCGTTGGGGCGCAAGTTTGTACGCATGAGCCTGGGGGGAGTACGAGATGAAGCCGAGATCCGTGGCCATCGTCGGACGTACATCGGTGCATTGCCCGGCCGAATACTCCAAGGCCTCAAGAAAGCAGGGTCGGCCAATCCAGTTTTCATGCTGGACGAAGTGGACAAGGTAGGATCGAATCGTCACCAGGGAGATCCATCCAGCGCATTGTTGGAGGTGCTTGATCCAGAGCAGAATGTTGCCTTCAATGACCACTACTTGGAATTGGATTACGATCTGTCCAAGGTCCTCTTTATAGCGACGGCCAACTACCTTCCAATGATTCCGGCTCCGCTCCGTGATCGCATGGAGTTGATCAACATCACCGGCTATACGCAAGACGAAAAGCTCTGCATAGCCAAGGGTTTCCTGGTGCCACGTCAGGTGGAGCGCAATGGACTCACCCCCAAACAAATCATTTTCGATGACGGGGCGCTGAACCTAATCATAGATGGATACACGCGCGAATCTGGAGTGCGCCAGCTCGAGCGTACTATCGGAGGTGTGGTTCGGGGCGTAGCCAAGAAGGTCGCTACCGAAGAAATCGAATCCGCAGAAATAAAGAAGAGTGATGTGGAGGAATACCTTGGTGCGCGCAAACACTACAGCGAGGTGGCCGAGCGTACCGAAGTGCCGGGTGTAGCTACCGGACTGGCTTGGACACCCACGGGCGGAGACATCCTGTTTGTAGAGGCCTCACTCTCGCGCGGCTCCGGCAAACTGATTTTGACGGGCAGCCTCGGGGATGTAATGAAGGAATCGGCTCAGGCCGCGCTCAGTTATGTGAAGTCGCGCGTAGATGATTTTCATATTACGTACGATGCCTTCAAGAACTGGGACTTGCATATTCATGTGCCTGCGGGCGCGGTCGCCAAGGACGGACCGTCGGCGGGCGTGGCGTTGATATCGGCTCTGGTCTCAATCTACACGCAGCGCCGTGTGAAGCACAACATAGCGATGACTGGAGAGATTACGCTGCGCGGACTGGTGCTCCCGGTAGGAGGCATCAAGGAGAAAGTGCTCGCCGCCAAGCGTGCAGGAATAAGCCACATCCTTGTGCCCGAAAAGAATGAAAAGGACGTCAAGGAAATCAAGAGCGATGCATTGGAGGGGCTGGAGGTTTCCTACATCCACCGTATGGATGAAGCACTCGCACAAAACCTCGAGTTGACACCGGTGCAGGATCCAGCTGACCTCTTTGCCAGTGCCGCGTCAAGCAATGGAGCCGCAAGCGGGGTGACGGCTAGCACGTGA

Transcript

ANN28088-RA

Protein

Uniprot

Uniprot term	Description
Q11QT1	Lon protease OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=lon PE=3 SV=1
A5FG89	Lon protease OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=lon PE=3 SV=1
B3QSJ7	Lon protease OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) OX=517418 GN=lon PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF02190	LON_substr_bdg	ATP-dependent protease La (LON) substrate-binding domain	Family	Interproscan
PF05362	Lon_C	Lon protease (S16) C-terminal proteolytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003111	Domain	Lon protease, N-terminal domain	Interproscan
IPR004815	Family	Lon protease, bacterial/eukaryotic-type	Interproscan
IPR027065	Family	Lon protease	Interproscan
IPR027543	Family	Lon protease, bacterial	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan
IPR008268	Active_site	Peptidase S16, active site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008269	Domain	Peptidase S16, Lon proteolytic domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR046336	Homologous_superfamily	Lon protease, N-terminal domain superfamily	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10046	ATP DEPENDENT LON PROTEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01338	lon; ATP-dependent Lon protease	EC:3.4.21.53	Peptidases and inhibitors	ko01002	deepkoala