Detailed information of ANN28212-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:38790383...38814641
NR annotation: CAH3017745.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O15085Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1
Q9ES67Rho guanine nucleotide exchange factor 11 OS=Rattus norvegicus OX=10116 GN=Arhgef11 PE=1 SV=1
Q92888Rho guanine nucleotide exchange factor 1 OS=Homo sapiens OX=9606 GN=ARHGEF1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17838
all species →		PH_16PH domainDomainInterproscan
PF12762
all species →		DDE_Tnp_IS1595ISXO2-like transposase domainDomainInterproscan
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR041020
all species →		DomainARHGEF1-like, PH domainInterproscan
IPR024445
all species →		DomainISXO2-like transposase domainInterproscan
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45872
all species →		RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0001664
all species →		Molecular FunctionG protein-coupled receptor bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28212-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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