Detailed information of ANN28222-RA in Montipora grisea

Genomic Location: Scaffold_2872__1_contigs__length_39615:12928...14457
NR annotation: VVW88757.1, unnamed protein product, partial [Nymphaea colorata]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2QYW2Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0104800 PE=3 SV=1
Q2RBN7Clathrin heavy chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0104900 PE=3 SV=1
P49951Clathrin heavy chain 1 OS=Bos taurus OX=9913 GN=CLTC PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005110 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13838
all species →		Clathrin_H_linkClathrin-H-linkRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016025
all species →		Homologous_superfamilyClathrin heavy chain, N-terminalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10292
all species →		CLATHRIN HEAVY CHAIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030130
all species →		Cellular Componentclathrin coat of trans-Golgi network vesicleInterproscan
GO:0030132
all species →		Cellular Componentclathrin coat of coated pitInterproscan
GO:0006898
all species →		Biological Processreceptor-mediated endocytosisInterproscan
GO:0032051
all species →		Molecular Functionclathrin light chain bindingInterproscan
GO:0071439
all species →		Cellular Componentclathrin complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28222-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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