Detailed information of ANN28242-RA in Leptoseris scabra

Genomic Location: Scaffold_13__1_contigs__length_39802057:39273552...39295139
NR annotation: KAJ7381402.1, Importin subunit alpha-3 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35343Importin subunit alpha-3 OS=Mus musculus OX=10090 GN=Kpna4 PE=1 SV=1
O00629Importin subunit alpha-3 OS=Homo sapiens OX=9606 GN=KPNA4 PE=1 SV=1
O35344Importin subunit alpha-4 OS=Mus musculus OX=10090 GN=Kpna3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001150 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00514
all species →
ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF16186
all species →
Arm_3Atypical Arm repeat RepeatInterproscan
PF01749
all species →
IBBImportin beta binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR036975
all species →
Homologous_superfamilyImportin-alpha, importin-beta-binding domain superfamilyInterproscan
IPR002652
all species →
DomainImportin-alpha, importin-beta-binding domainInterproscan
IPR000225
all species →
RepeatArmadilloInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR032413
all species →
RepeatAtypical Arm repeatInterproscan
IPR024931
all species →
FamilyImportin subunit alphaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23316
all species →
IMPORTIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006606
all species →
Biological Processprotein import into nucleusInterproscan
GO:0061608
all species →
Molecular Functionnuclear import signal receptor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006607
all species →
Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0008139
all species →
Molecular Functionnuclear localization sequence bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28242-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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